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54-3784-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26527673 [Map]; Strand: w
      • AT1G70380.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -328; Region: promoter
    Flanking Genome Sequence: 54-3784-1 - 5-prime edge 
    NTGAANTCGA CAGGGTNCCT TTCATTGNNC ACGGTTNAGN NGCGGAATTC 
    ATCGNATNNN CTGTGATTCA CACGTCNCTA ATATGGATGA CATGAGTCAC 
    ATTGATTAAT TATTTGTAAC NTGCATGAGA AAAAGATGTA ATCACACGTA 
    AAGTAATATT ATTTATGAAA ATTTAGCATA TAAAAACTGA AAGTGACAGA 
    TTTGCTTTCA ATTGTACACG GTTTAGTAGT TTAATTCTTT GAATGAGATT 
    TGAATCATAC GTCAAAATAT AGATGAGAAA ATTCACATTA ATTATTTTGT 
    AACTGGATGA GTAAAAATAT GTCCCACGTC AAAACCTACA AATTAGTAAG 
    AGATTTGGTG TTAAGCGTGA CTTAAAAGGT TTATCTTTCA TCGTACACAA 
    TCCACAGAAT CAATAGAAAC ACGTTTCTAA CTTTTTAATG GTTTTCACTT 
    TTCACTTTGA TTATTTGTAC ACAATTTTTG AAAGGGACGT TTCACATACA 
    CGCATAAAAA CTTACATACC ACTTCTCTTA AATATCTTTA TTTTTCATCA 
    GGTTACTCGT TGAAGATTGT TTGGTAGGAT TTAAAATTGA ATACAATGAT 
    GTAATGTTCT TATTATTAAT TATACTATTC AAAGTGTTAT TGTTGGTTAT 
    AAGTACTTCA CAAAGTTAAA AGTCCAGCCN AACAGTAAAA GTACAATATT 
    TAAACCAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26527558 [Map]; Strand: w
      • AT1G70380.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -213; Region: promoter
    Flanking Genome Sequence: 54-3784-1 - 3-prime edge 
    GAATTTCATG TTTTATCTAA TAATCTCTAT TCTAATTGGC TAATAATTTT 
    AGTAAGTCGT TAACGTGTGG AAGTGAAACA TCTGCTTTAA TTTGTTTAAA 
    TGAAAGTAAA TTAGATTAAA AATATGCGCA TTACAAAACT CAACAAGTTA 
    AACTAAAGTC ACCTACTCAC AACAAACTCT TGAGATTTGC TATAAATACT 
    TCACATCTGT GCATTTGTCT CCAACACAAA AAAATATATA TCATTAGAGC 
    AGAAAAAAAA AAAAAGGGGG NANCCNANNT TNAAAANCCT TNGNTTNAAA 
    NNNNNAAAAA NAANTTTGGG CCCAANGNCC TTNNAAANCC TNANGGNAAG 
    NCNNGGNCNN NNAAAAAAAN GGGGCNTTTT NANNCCGGGG GNAAANNTTA 
    AAANGGGTTN NTTNGNNCCA AAAAANNAAA GGGCCNNANN GGNGGTNCNC 
    CCTTNGNCNA NCCCCAAANT TNNNCCCCAA ANCCGGTTTT NNTTTNNTTT 
    NNAAAAANCC CCCTTNGNNN NNNNNGGNNA ANNGGNAANN NCTCCCCGNT 
    NTTCCNNTNN CCCCGNTTTT ANGGGTTNNN AACCCNNTNN TGGGNNGGCN 
    TNGNNNNNAG GGATNNAANA NGGAAATGGG ATTTGGCANC CCCGGCCGNA 
    AAAGGTTNGG GANTTTNCCG NAAANCCANG GCCCGGANGN GCCCNCCGNG 
    NAAAGTTTTT TGGGAACCAA AAAAGN

AT1G70380.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G70960.1); Has 1387 Blast hits to 1338 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1387; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR