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54-3817-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26385884 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-3817-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGGT ATGCATAACC CTTTTTTACC CGATTCTTTG 
    CAGCTGTCAA CCCTTGTTGC TCTTCAAGAC TGGGTTTCTC ATACTGACAT 
    CAACAGTTTT GATATATTGT TGTGCATTGG TAACAAAGTA GATCGTGTCC 
    CTCATCACCT TGCTCATGAT GAATATAGAC GGCGCCTTTT GAAGGCATCA 
    GACCCCTCTA GAGATCTGTA TTCGGACATT GATGACTTTG GGATCTCCGA 
    AACTGAAGGA AGCAGCTTGT TGGGAAGTGA AGATGCATCA CTAGATATCA 
    GGGGAGCATG TCTTGAGTGG TGCTCTGAGA ATAACATTGA GTTCATTGAG 
    GCTTGTGCCT CTAATCCTGA TTTTGACAAG TGTAAGTTCT ATCTCCTTCC 
    TTCTGATTAT ATATTGACTG CAATATGCCC AATGTAATCT GGTTACTCCT 
    TGTATAGCTT CTACTGAACT TGTGAATGAA AAGTGAGTGA AAATGGATGA 
    GCAGAGAATA CGCGTATTCG TCTCTCTAGC ATTAATGAGG CTCACGGGTT 
    GGTCCTTGTA GGTTTATCAG TCGATGGGGA TTCTCAAGGG GTTGAACGTC 
    TATTTGGTGC TCTTTCGGCT CATATGTGGC CTGGGATGAT TCTGAAATCT 
    GGTGATAGGA TAAATGAACC TGTGTTACCT CAAGGGGAAG GTTAATTGTT 
    TCTTNCACTT TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26385839 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-3817-1 - 3-prime edge 
    GTTATGCAGG GATGGTAAGG TGAGAAGAAT GAAGCGTGTA TCATCATCAT 
    CATCATCAAT GTCAAACCTC ACTCAAGTCG AAGACCATAA CTAACGCCAC 
    CAGTGGATGT GAGTTAGGGA GATTGGGTAG AGAGTATTCA TCGCAAATAT 
    GTGATATACA TACAGAAACA TCCGCAGTGT AATACTTAGT GTTAATCGTC 
    CAGCTGCCCA CATTTTACAG AGAGAAAAAA GAGTTCAAAC GATGAAACTT 
    GTTAGGGTAA GAAATTCTTC AGTACTAGAC GTACCCATGA ACTTCTGTTT 
    GAGATGATGA CTCCGATGAA TCCTCAAATT CCACAGAGAG CAATCCTGTG 
    ATTGATTACA TATTAGAGCA AAACAAAATT TTGAATCGGA TC

AT5G65960.1

Model type
Protein coding
Short Description
GTP binding
Computational Description
GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR