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Mutant Lines
54-3822-1

54-3822-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 16693500 [Map]; Strand: c
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -409; Region: promoter
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -409; Region: promoter

GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TCTTGAGACC CCATCCTTAA GGTTTGATTA 
TTTGGGTAAT CCGAATATTA TTTCTTAAAG ATTTGATGTT TATTATTGGT 
TTGGTTGGTT GCTGCTACTA TTCTTGGTTT CATAGTAAAA GAGATGTTGA 
AGAAAGTTAT TACAGAGTTA CAATTGTTAT GATTATAAGA TCAATCAATC 
TGGCAAAAAG TAATTACTAA AAAGTAGAAA GTAAAAACAC GAATCAATAA 
TACAAGATTC ATTCAAATGA CCATTTTAGG AGGCTTGAAC CAGGAGCAGC 
TTTTATAGAC CAGTCTCAGC CGCCATATCA CTCCCTGAAT GTAAGTTCAA 
GGCCAATTGT AGACTGTATA AAGTAACTCA CTAATGTAAG ATTATGATTC 
TTAAGTAATT CACAAGGTAA CAAGATTTTT CTTAATATGT CATCAATATC 
CCTATCAAGA CTAGATTCGA TCCTAGATAA TAGAAGTTCC CACTCGTGCT 
TGCTCTCCCC ACGCAAAGAT GCACCGACGA CAGAAAGGCC TAATGGAAGA 
TTGCCGCAAA GCTCAGCTAC TTTATTGGCA AGCTCTTCAA AACCATCTAG 
TACAGAGCTT TGTTTGAAAG CAGAGAGACA TAAGATCTCA AGAGCTTCTT 
TCATGGATGG ATAATCAACA CGGTAGATAT CGTGAATCCT ATGTGCCTTC 
AAAATCTTCT TATCTTCTGN GG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 16693496 [Map]; Strand: c
  - AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -413; Region: promoter
  - AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -413; Region: promoter
Flanking Genome Sequence: 54-3822-1 - 3-prime edge
```
ATTTGAAAAC GGTAGAGGTA TTTTACCGNC CGTTACCGAC CGTTTTCATC 
TCTCAACGAC TTTTGGGGGA AACATTTTGT TTTTGTATTT TTCTCTACAG 
TGACAAATTC CTTTGAAATT TCAGTTCCGT ATATAGCTTA TCCAAAACAT 
CAAATTAAGC ATCGTGATCC ATAATTAGAA GCT
```

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR