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54-3835-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 330285 [Map]; Strand: c
      • AT3G01990.1 - [+] show detail - ACT domain repeat 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3835-1 - 5-prime edge 
    AAACAGAGGA CCTAGAAAAC AATAAAAGAG TATGGAGAGA AAGAGAAAAA 
    CCTGGGAGGA TTCATTCTCC TGATGAGCTT GGCATATTCA TCATCATCCA 
    TGGTTGTAGT ATGTATCTCC TTGGTGATTT GGCTGCAGCA GAAACCCAGA 
    AGAGTGTGAG TCCTCCAATT TCTGAGGAAA ATTCCTAAAA GAGAGAGGGA 
    GAGGGAAGTT GAAGGAGGAT AAAAATGGTA GGCCACCGGA ACCGAACCTT 
    GTTTTCATTA GTTGATCGAG CACGTGCCAC TAAAGATTCT TAGAGATGAC 
    GTGGCACGGG CACAGCAACT TTAAGATTCT GTTATAATTG TTCGAATACT 
    ACCAAAAGTC GGGTGAAGAT TTGGGGTCAA TTTGATGATC ATAAAGGGGA 
    TTATATTCTC CTTCTCAAGC AAGATGTGGT ATTTACTAGT ATAATAGATC 
    ATTCGTTATC TTGAGGTAGA CCTCTCCGTA ACGTTCACAG GTGCATGACC 
    AAGTAACAAT TTGATTCCTT TCCAGCATAA CGTCATGTTG GTTGCAAAAA 
    GAAGGCAAAG TAGAGCAAGC AAGCAAGCAA AGCATTTTTC TTATTTTATA 
    TTTTGTTGCG GATTCCACCA CCCACTTGAA AAATTGACAT GTCACAATGA 
    TTTCGTATCC TAGTCTTTTA TTATTTAACA CTCTCACAAT CCCATTACTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 330352 [Map]; Strand: c
      • AT3G01990.1 - [+] show detail - ACT domain repeat 6
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-3835-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGTGTTTCTC CATGCTCCGT TTGTGAGCCT CTATACCCTT GTAAAGATTC 
    CAGCTGCTAA AACATTCATC TTTATTTATG TATGTTTCAT GGTGGATACA 
    GAGTTGTAAT AGACAACAAC GCAAGCGACG ATGCCACTGT TATTCAGGTA 
    AATAAATCTG TCTCTTCAAA TTGTTCAAGT GGTTCTGTAC CAAACAAAGA 
    GATTTTGAGA AAACAGAGTT CCCTGTTTGT TTGTGGTGCT AAATAAAAGG 
    TTGATAGTGT GAACAAACAT GGGACTCTAT TGGAAGTAGT ACAAGTGCTC 
    ACTGATATGA ATCTTGTGAT CAAGAAAGCT

AT3G01990.1

Model type
Protein coding
Short Description
ACT domain repeat 6
Curator Summary
Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.
Computational Description
ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink).
Link
InterPro Scan - TAIR