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54-3844-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289449 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -599; Region: promoter
    Flanking Genome Sequence: 54-3844-1 - 5-prime edge 
    GATAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCCTA CATATCGATA GATAGATACA GATTCAAAGA 
    AGAGAGTTAT ATACATGGCA TGTTTGTTGA TTACTCTATC CAGAAGAAGA 
    TTCACAGCAT AGAGTCGGTC ATGGCTGGAA GTCGCCGGAA AAAGTTGACN 
    GGGAGCAGGA GGGAATGCGG TGTCGGAGCT TTGGATGTCG CATGAAGTAG 
    TAGCCGGATA AGAGAGCGAC AAGTTTAAAA GGGGTAATGT AGAGAGCCAT 
    GGCAATAATG AAACAGAACG TCACGAATAT TGCGGTGGCG CGTGGATCAC 
    GCCAGCTCAG CAACGCTTGC ACTCGCTCTC CTTGTGCGGC TATGTCTCCA 
    GCCACCGACT GTACCTTCCC GGCCACAGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289445 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -603; Region: promoter
    Flanking Genome Sequence: 54-3844-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
    TCGATATGCA TCTATATGTG TTGACAATCA TGCGTTCGTG AACTCGTTCT 
    CCGAATTAAC AATGGTGATC GCAAACAAAC TCTGATGATC AAATCAAATA 
    AATTGCTTCC ACACTCGCAA TGTTGAAACA GAGAATCTAA AAGCTCAAAA 
    CAGAGTCGGT TAGATCCTAA CAAACTCTTT AAACCATCTC CAATTCGCAA 
    CCAAAGCTAA ACCATCGCTT CCACAAAACT AATTGGTCGA TAACCAGCCT 
    AAACCCGGTT TGATTTAAGC TGAACCAGAT CCGTGTGATC AATATATAAA 
    AAAGCCCATG GGCCTTGAAC AAAACAACGT CACATCGGTG ATTAACACTG 
    TTTTTAGTGC TTAATTAGTT CCCTCCCTGA TTACAAAAGT CCGTTAGTGA 
    TTACGGCATG AAGAGACAAC GGGAAAGAGG AAGAAGCATA TCTCTCTCTC 
    TGTCTTGTTC TATGAACGAG ACCACTTGCT TTAACAGGCG GGGCTAATTA 
    TTTTTCAGAA AATAAAAACC CCCAAAATCT GTCCGACAAC AATTTATTAA 
    TCAACTCTTT TTTTTTTTTT NTNTAAGGTA ANGGCCAAAT TCTTTNTTNT 
    TTCCNCCCCT TAAAAATTTT NTCAACTTGN CGGGAAAAAT AANNCTGGGN 
    TAANNCNANN TTNTTTCTNG GNCTTNTTNT TTNAATTTTN AATAAAAANA 
    ANNCNAGAGG GGNNTCCTTT AAAACCCGTT TCCCN

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00710.1

Model type
Protein coding
Short Description
BR-signaling kinase 3
Curator Summary
Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 3 (BSK3); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT1G01740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR