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Mutant Lines
54-3882-1

54-3882-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26458640 [Map]; Strand: w
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon3 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon4 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon3 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon3 (CDS)

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TCCTATCCAG CAATTCGCCT CCTTCGCACA 
ACCTAGAAGA AAGGCAAGAG TAAAATGTGA ATGCCACCGA TACATGAAGG 
ATAGACTATA AGAAATGACG TAAGTTATTG TGAAACTGAA CAACATTCTC 
GTGGCCAGAG AGAGCAATAA GAATCTGAAC CTCACGCTTG ACAGTCAGCA 
TCATCACACC AAAAGTTAGG CCCGAATAGT TTGAAATTAG AAAGCTCGCA 
ATTGAGGTCT CCAATACGCA AACCGCCTCT CCCCGCGCGT TGGCCGATTC 
ATTAATGCAG CTGGCACGAC AGGTTTCCCG ACTGGAAAGC GGGCAGTGAG 
CGCAACGCAA TTAATGTGAG TTAGCTCACT CATTAGGCAC CCCAGGCTTT 
ACACTTTATG CTTCCGGCTC GTATGTTGTG TGGAATTGTG AGCGGATAAC 
AATTTCACAC AGGAAACAGC TATGACATGA TTACGAATT

3 prime edge [+] show sequence

Chromosome: 5; Position: 26458628 [Map]; Strand: w
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron3 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron4 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron3 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron3 (CDS)

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCCC 
AAGTTAGTCA GCATCTCTCA CTACTCTTTA ATCTATTACC GGTGGAATCG 
TAAGAAAGAA CCTACCTTCT CATTATTGAT GCTTTCCTTT TTTTATTTTT 
CAGGAAAGGT AATCGGTACT CCGAGAAAGA TGCAGCCGTT GTCGTTAGGC 
AGATGCTCAA AGTTGCAGGA GAATGTCATC TACACGGTCT TGTACATAGA 
GATATGAAAC CAGAGGTACA TTCTCTTGCT TATACCTCTT AGGATGTGCT 
TTTTGTTTCT AATAATAAAT CTTCTGCTTT TGCTCCTCCT CCAATTTCTT 
GCAGAACTTT TTGTTCAAAT CAGCTCAACT AGATTCGCCT CTAAAGGCTA 
CGGATTTTGG TTTATCGGAT TTTATCAAAC CAGGTTAGTA CTAGCTATCA 
AAATCCACAC AAGCAAAGTA AGTGTTAAGA GCCTATTCTG TTGATTTCTG 
TGATAAACAA CTCAATCCTT CACAGGGAAA AGGTTCCATG ACATTGTTGG 
TAGCGCCTAT TATGTGGCTC CTGAGGTATT AAAGCGCAGA TCAGGGCCTG 
AATCAGATGT ATGGAGCATT GGTGTGATTA CGTATATATT ACTTTGTGGG 
AGGCGGCCTT TTTGGGATAG AACTGAAGAT GGTATATTTA AAGAGGTGTA 
GTTGAAAACT TTCTTTCACT GGATTTCTAT CTATAGCTTT TCTTATTTCT 
TTCTCACTTC CTTACTAAT

AT5G66210.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.3

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.4

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR