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54-3902-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 144303 [Map]; Strand: w
      • AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3902-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TGTGTCGGTG GATGTACGGG CAGGGGTTGT 
    CGGGAAGGAA CGATCGGTGA AAGTAGTGTT ACTGTAATTG GAAGATGTGG 
    TTGCAGGAGA TCCGACGGTG TAGCTATGTC TCCGACGACT GGGCATCGGA 
    AAGTTCGTGG AGAACGTGTA GCAATGGCGA ACACGGAAGG AAGGAAGAGT 
    CGGAGAGACT GACTTTACAA TGTTTCAACT TTTTCTTCGC CGTTGAAAAA 
    GACGACTGTT TTGGGTATTT ATTGACGCCA GCTGTACAAC TTGACGTTCT 
    CTGATTAACA AAATTTAAAC CCGACAAGCT AAGATAATTA ATGTGTATAA 
    TTTCCTTTTT TTATTACATT TTGTCTAATG ATTTGTAATA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 144300 [Map]; Strand: w
      • AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3902-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AACCACCTCC ATCGCTCGTC GCATCTCCGG TATCTTCATC AACTGCTTCA 
    CTCCTCCCGA TTCCGTTTCC TCCAAATACA TCGACAATTC AAAGTCCTCT 
    TCCGGTATAG TTTGATCAGT AGATTCTTCG ATTTTAGACT TTTAGTGGAA 
    ACAGTTGATG ATGATTTTAT TTGGTCTCTG TGTGAGCAGA CAATAATATC 
    CGTAGTAGAC GTAGCTCAAC AGGAAGTAGT AGTGTACAGA GGAGTTATGG 
    AAATGCGAAC GAAACAGAGC ATACAAGATT CACCTTCGAT GAAATCTACG 
    ACGCTACTAA GAACTTCTCT CCGTCCTTTA GGATCGGACA AGGAGGTTTT 
    GGCACTGTTT ACAAGGTCAA ACTCAGAGAT GGCAAAACCT TTGCTGTGAA 
    ACGTGCCAAA AAGGTTTGAA TATTCCTTTC TAAGTCCTGT CTTAATGGAG 
    ATTGTCGCTA TAACATTGTA ACTAACTTGA TGCAGAGTAT GCATGACGAC 
    CGTCAAGGTG CAGATGCAGA GTTTATGAGT GAGATTCAGA CATTAGCTCA 
    AGTTACTCAT TTGAGTTTGG TTAAATACTA TGGATTTGTT GTTCACAACG 
    ACGAGAAGAT TCTCGTTGTG GAGTATGTAC CCAATGGAAC TCTTAGAGAT 
    CACTTGGATT GTGAGTACAC ATCCTACTAC TATCTTCTTT TTGTATATAT 
    TCATTTCAAG CTAATCGATC AATGTG

AT4G00330.1

Model type
Protein coding
Short Description
calmodulin-binding receptor-like cytoplasmic kinase 2
Curator Summary
high overall homology to CRCK1
Computational Description
calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR