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54-3907-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26767997 [Map]; Strand: w
      • AT1G70990.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3907-1 - 5-prime edge 
    TTCTCCGGCA TGGTGAGAGT TGTTATATGC CTGGAGAATC GAATAAAGAG 
    AGGTTTGGGA AGATTCTTTG GTTGGACGTA AAAAGAGTTG AAAATTTGGT 
    GAGGTGGTTT GGTAAGAGGG TGCATGGGAC NTGATATACT AGCTAGTACT 
    TCTTCAAGAC TATAAATTTC TGTCTAAATT TTGTTTTTTA TTTTATTTCT 
    ATTGATAAGA TACAAAAATA CTTTACAACA TGCAAGAATC AAAAGAAGAA 
    GAAGAATATA TTCTATAGGG AAAATTGAAA TCGGCTCTTA GTTACATGTG 
    AGTTGGAGCT TCAAATAAGG GGTCCCATAT GGACCATCTA ACATAAAATC 
    GTGTTAGTTG AAATATAATT AAATACAACT ATAGTGGAAT TATTAGCCTT 
    TAATCCACCG TCGTCCACCC AAAAATAAAA TATTCACGAA TTTATACGCT 
    TAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26767881 [Map]; Strand: w
      • AT1G70990.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3907-1 - 3-prime edge 
    CCGGAGAAAA CTCGCCGTAC AAAGGCTCTC GCCGCCACGC TCTTGACGAC 
    AGTGGTGTTT CTCACGTTTC CAATGATCAT CAACGCTTCA GATTCATCAA 
    CCAATAGAAA ACTCGAAGAG GATC

AT1G70990.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G23040.1); Has 16801 Blast hits to 6974 proteins in 537 species: Archae - 26; Bacteria - 1654; Metazoa - 5189; Fungi - 1184; Plants - 5387; Viruses - 1054; Other Eukaryotes - 2307 (source: NCBI BLink).
Link
InterPro Scan - TAIR