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54-3935-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26856346 [Map]; Strand: w
      • AT5G67310.1 - [+] show detail - cytochrome P450, family 81, subfamily G, polypeptide 1
        Distance: 0; Region: exon1 (CDS)
      • AT5G67320.1 - [+] show detail - WD-40 repeat family protein
        Distance: -808; Region: promoter
    Flanking Genome Sequence: 54-3935-1 - 5-prime edge 
    TTCCGAACTT CCTTAGTTTC CTCGTCTTCC TCTCGTTTTC CAGCGACCAT 
    GCTCATTAGG ATGTTATACG TAAGCCCATA AACAAACGGC TGGAGTTTCA 
    ATCTGACACT GCCTCCTGAT GTTACCAGTT CCACNGTTGA TCTTCCGAAT 
    CATAGCTCTC ACTTCGTCTC TCCGTATATC CGAAAAGTCT CTGAGACGAG 
    CGGTGGACAA GATATCTACG GCGCAGAAAC GGCGGAGTCT GCGCCAATGC 
    TCCCCGTACG GAGCTGTGCT AACCAGCGTG TTGTTGTAAC CCATGTATTC 
    AGTTAAAGTA GCGAGAGGCC TGTTGGCGAA AACAACATCG TTTTGCTGAG 
    ATAAGAACTC CTCCGCAGCT GAAGCTGACG TTACAACCAC CGCTCGACGA 
    GAGCCTAGCC GGAGAATAAA CACGTCGCTG CCGAGGTTTC GAGAGAGGTC 
    ACGAAGAGAA CGGTGAACAG GTTCTTTGAG AAGGTGGAGG TGTCCGATCA 
    CCGGAAAACC TACAGGATTT GGCGGTAAAT TCTTCTTCTG CTTTGATCGG 
    AAAACATACG CCACTGCAAT GAATCCGGCC ATGAGAGCGA GTAGAAACAA 
    ATCAATCATC TCACCCATTC GTGAACACAT AATTCTGGAG ACTAGTCGCA 
    TGATTCTGGA GAGTAGTCAA AAAAATACCA GAGGTCTCAC TATTATAATA 
    TACGAGGGAG CGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26856230 [Map]; Strand: w
      • AT5G67310.1 - [+] show detail - cytochrome P450, family 81, subfamily G, polypeptide 1
        Distance: 0; Region: exon1 (CDS)
      • AT5G67320.1 - [+] show detail - WD-40 repeat family protein
        Distance: -924; Region: promoter
    Flanking Genome Sequence: 54-3935-1 - 3-prime edge 
    GTTCGGAAGC TGATTAGGGA GGCGTTCGAT TTCGCTGGTG TTAATTATGT 
    CGGAGATTTT CTCCCGACTC TGAAGCTCTT TGATCTTGAT GGATACAGAA 
    AGAGAGCAAA GAAACTCGCT TCGAAATTGG ACAAGTTTAT GCAGAAATTA 
    GTCGACGAGC ATCGGAAAAA CAGAGGAAAA GCAGAGCTTG AGAAAACGAT 
    GATCACTCGT TTGCTGTCTC TTCAAGAATC AGAACCTGAA TGTTACACTG 
    ATGATACCAT CAAAGGGCTC GTACAGGTAC ATGAGTTTTT AATTCCTATA 
    ATTTTGAATC GTTAATAGGA GTGATCAAGA TTGATTCATC AAAGATTCAA 
    AGGATTCATT GCAGGTGATG TTGCTTGCTG GAACGGACAC AACCGCAGTG 
    ACGTTGGAGT GGGCTATGGC TAACCTTCTT AATCATCCGG AAGTTTTAAG 
    GAAACTCAAA ACGGTACTAA ACGAGGTTTC GAAAGAAGGG CGTGTGTTTG 
    AGGAATCAGA TACTGGCAAG TGTCCCTATC TCAACAATGT GATCTCTGAG 
    ACTCTTCGTT TGTTTCCGGC GGCGCCCTTA CTTGTCCCAC ACGCTTCATC 
    CACTGACTGT GAAGTCGCTG GATTTGACAT TTCCACGTGG CACCTGGCTA 
    TTCATCAATG CGTGGGCTAT TCAGAGAGAC CCAAAGGTAT GGGATGACCC 
    AGAAACTTTC AAACCAGAGA GGTTTGAATC AGAN

AT5G67310.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily G, polypeptide 1
Curator Summary
member of CYP81G
Computational Description
"cytochrome P450, family 81, subfamily G, polypeptide 1" (CYP81G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 81d1 (TAIR:AT5G36220.1); Has 36328 Blast hits to 36160 proteins in 1849 species: Archae - 61; Bacteria - 5991; Metazoa - 11867; Fungi - 7314; Plants - 9530; Viruses - 3; Other Eukaryotes - 1562 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67320.1

Model type
Protein coding
Short Description
WD-40 repeat family protein
Curator Summary
Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.
Computational Description
high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR