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Mutant Lines
54-3957-1

54-3957-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19447500 [Map]; Strand: c
- AT2G47410.2 - [+] show detail - WD40/YVTN repeat-like-containing domain;Bromodomain
  Distance: -639; Region: promoter
- AT2G47410.1 - [+] show detail - WD40/YVTN repeat-like-containing domain;Bromodomain
  Distance: -807; Region: promoter

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCACTAAG ATCATCTCAG CCTCATCTAA ACTTAATTGA 
GTTTTTTATT ATCAATTTCA CGAAACTGCA AATGTAATCG AACCAAACAC 
ATTATGAAAC ATATGTTGTG TATTGTACTA TTCATATTCA TTTATCACAT 
TACAATCATC AACCAAACCA AAAACACAAA CATAACAACA AGGGACAAGA 
AGAACAAACA TTGATCCATA CCTAAAGTTT CATAATTCGA ACATCAAAAA 
CATATTTTTT AATTATCATA AGTACGACAC TCATCAGTCT CAGGATTATC 
ATTGCAATAC TCTTCCAAAG GATCGGAGCC ACCAGCTTTC TTCTTGTCCC 
TAGCATGACT CGCCGCCGCA CTCAGCTCCT CCACCTCGTC CCAAGCCGCT 
ACACACTCCC CGCTCACCGG ATCATCAGCG CATGTCTCCT TAGCTTCTTG 
TATACTCTTC TCCACCTTCT CCGATATCTC TCCTTCCGAT GTAGCCTTAA 
CCACAACCAT CCGCTTCATC GAACCGAATT TCCACGGGTA ATTCAACCGG 
ACCGGACCTA ATACACGAGC CACAGGTCGA ACGACCACTC GTGGAGTCGC 
GACGTTGAGG CCAGCTGCAG CTATGGTTGT CATCGTCGGA GGATTTTGAT 
GGAGGAGAAA AGTTTTTTGA TGTGAAGAGA TGAAGAAGAT AAAATATACT 
CGNTCACGTT ATTAAACTCT GTGAACACAA TCCTCT

3 prime edge [+] show sequence

Chromosome: 2; Position: 19447501 [Map]; Strand: c
- AT2G47410.2 - [+] show detail - WD40/YVTN repeat-like-containing domain;Bromodomain
  Distance: -638; Region: promoter
- AT2G47410.1 - [+] show detail - WD40/YVTN repeat-like-containing domain;Bromodomain
  Distance: -806; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATTCTTAGGT CACTCGCATA CGTTCCTTAT TATTTTTTTG TGGATGTGGA 
GATGTATGTG TCAAAACGAC GTTGAGCCGA GAGAAAGATG AATTGATCGA 
GAGTTTCTTA GACGGTTTTA AAATTGCTGC CTTGCTGGTA TGGGAATTAA 
TCTTTGGTTT CAACAAGATG GGTAACAACA AACAAGCCCA TGTAATTATG 
TTGATGCAGT GTAATGGGCT TTATCAAGCA TGGGCCGATG TACAAATTTG 
ACATATAGAA TAGAACCAGT TTGTGGCCAG CCTCAAGGTG ATGAGAAACA 
GTAAATATAT TAAGGAATAA GTGAACTAAA TAATTTGACA AAAAAAAAAN 
CCCCNGAANN GTNTNCANTT TTNTNGTTGG ANANCAAANT TNGGNAAGTT 
AAGGNANNNA NTTNCCANCC NGGNCCGTNA NCCACCNGGC CCCCTTAAA

AT2G47410.1

Model type: Protein coding
Short Description: WD40/YVTN repeat-like-containing domain;Bromodomain
Computational Description: WD40/YVTN repeat-like-containing domain;Bromodomain; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1); Has 67123 Blast hits to 29366 proteins in 847 species: Archae - 50; Bacteria - 8348; Metazoa - 26818; Fungi - 14890; Plants - 8157; Viruses - 8; Other Eukaryotes - 8852 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47410.2

Model type: Protein coding
Short Description: WD40/YVTN repeat-like-containing domain;Bromodomain
Computational Description: WD40/YVTN repeat-like-containing domain;Bromodomain; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1).
Link: InterPro Scan - TAIR