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54-4011-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163944 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -10; Region: promoter
    Flanking Genome Sequence: 54-4011-1 - 3-prime edge 
    CTAACAAGAA AACGAAAGGA TAGAGTTTGG ATGTTTGATG ATTGAAGGCG 
    GTGAGGTTGC TACGTTGGGG TTTTAAATGA TGGGGTTCGC AGACATGTGC 
    ATATGGGGGT AAGAGAGATT TGTAGATACG TGGAAATGAT GGTCCATTTT 
    TATTAATTTC TTAATTAATG GACAAACCTT TTGACTACGT ACGATTTCAA 
    GCCTAATTAT TTTAATCATG ATGGCTTTTT TAATTAGTAT TTGGATTTCT 
    CTTAAATTGT ACTACCACTA TTTCAACAAG ATGGTACTCG TGTGCATCAC 
    ATGCAACTAT TAAGTATAGC TTGTAGATTC ATGTTTATTT CAAGAGTATA 
    TCACCTTGTT ATTCAATTAC CTTCTTTTAT GTCACGTTAA AATTTTAGAA 
    TTAGGGTTTG GATGGTTATG ACGGTTGAGG CGGACAAAAC CGTCAACGGA 
    TCAAACCGTT TTTTATTTAC CATTCATCAA TTATAGTATG CACTACTTCG 
    TAGAAAAAAA AAAAANNNGC TTTNNNAAAG GGTTTTTNNN NNNNAAAAAA 
    NTTNNANNNN CATNANTTAT TNGNNCCCCT TAAAAANGAN GNNANTTAAC 
    CCTTNANCAA TTNAACCNGT TTNGNCGGNG GCCNCCTTTA AANGCTNCNA 
    NCCNGGCCNG NNAACCNCNG GGNNNNTTTA ANA

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR