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54-4031-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1799817 [Map]; Strand: w
      • AT3G05990.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4031-3 - 3-prime edge
    CCTCTCTGAC CTGTTCCTCT AATTCTCTCA TTCTTCAAAT TCTCTGGAGC 
    TGGAGGGTCA ACCCACCCCC CTCCTTCTTC CAACCTAAAC CTCTCTTTTA
    TGCTAACTTC TTCTCTACCA CCACCGTCTC CGCCGCCATG TCCCCTCTCC
    TCCTCCTCCT CCTCACAGTC TTCTCCCTCA TCTCCTCTTC CCTCTCTCAG
    CCCTCTCCTC CTTCAGGTAT CACCTCAATC TCTTCGTCCC ATTGCCTAAA
    TTCCTATCCC TTCCAATTTC CAATTTTGTT GACATTTCTA ATTTTACAAT
    TTAGCAATTC TGATCGATTG TGGCGCCTCT TCCTCCTCCG TAATCGACGG
    CCGACAATGG CAACCCGACG AGAATTTCGT CTCCAGCGGC ACACCAAAAA
    ACGTCTCCGA TCAAGTCCTC GACGAAATCT TATTCACTGT CAGATCTTTC
    CCTCTTTCCC TCGACGGAAC TCATCACAAG TTTTGCTACG TGATGAGCGT
    TTCTCGTGGC TGGAAGTATA TGATCAGGAC GACATACTAT TACGGAGGAG
    TTAACGGTAA AGGTACTCCT CCGCCGGTAT TTGATCAGAT TGTCGACGGC
    ACGTTATGGG GGATCGTCAA TACCACCGCC GATTACGCAG ATGGTCTCGC
    TTCTTATTAC GAAGGGGGTT TTTCTGGCGC AGGGGAAATC TATAAGCGTC
    TGCGTTGCT

AT3G05990.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19230.1); Has 48781 Blast hits to 12236 proteins in 453 species: Archae - 4; Bacteria - 457; Metazoa - 323; Fungi - 23; Plants - 45747; Viruses - 0; Other Eukaryotes - 2227 (source: NCBI BLink).
Link
InterPro Scan - TAIR