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54-4090-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13145975 [Map]; Strand: c
      • AT4G25850.2 - [+] show detail - OSBP(oxysterol binding protein)-related protein 4B
        Distance: 0; Region: exon5 (CDS)
      • AT4G25850.1 - [+] show detail - OSBP(oxysterol binding protein)-related protein 4B
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 54-4090-1 - 3-prime edge
    CTCACGTGGA CGTTGAGGTA AAGGGTAAAA GGGTAATGAA GCTTCTGAAT 
    CATATAGAGA CTTATGAGAT GGACCAACCG AGACTAATAA TGAGATTCTT
    ACCGGCGCCG GGAGCTTACT GGGCCGGAAA AGTGAAAATA AAGTGTCCGG
    AGACTGATCT CGAAGCTGAG TTACATTTGA TCTCCGATTC ATTCATTGAA
    AGATTCAGAG GCAACAACAA CAGATCAATA AAAGGAAAGA TC

AT4G25850.1

Model type
Protein coding
Short Description
OSBP(oxysterol binding protein)-related protein 4B
Computational Description
OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25850.2

Model type
Protein coding
Short Description
OSBP(oxysterol binding protein)-related protein 4B
Computational Description
OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1).
Link
InterPro Scan - TAIR