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54-4144-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11136524 [Map]; Strand: c
      • AT4G20790.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -101; Region: promoter
    Flanking Genome Sequence: 54-4144-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ACAACACCTC CAATAACACA GAAACTACCT 
    CTCTGCTTCT CTCTCTAATC TCACCCATAC ACGAAACCAA ATAACGAAAC 
    CTATTTGCTC TCTATCTCTC CAATGGCAGT CTTCTCTGTT CTTCATCTTC 
    TTCCTCACGT CACTACTATC ATCCTATCTT CCTCTCTCAG TATTCTCCGC 
    AACCGTCGTC GAAGACCTCG CTAATCTAAG TCCACCTCCT GATTTCAACA 
    CCACTATTTC CAACAACTGT CTTCGTGATC CAATGCTCCG TTACTGCAAC 
    AACACTTCCT CTTCTCCAAT GGACATTGTC GAGATTTTCA GATCCACAAT 
    CGTCGCTAGT CATCTCTGTA ACGAGTCCAA AAACCCTAAC TGCGTTGAAT 
    CTTTCCCTAG AATCAGAATT

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: 54-4144-1 - 3-prime edge 
    TTGAANACGG NAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TTGTTGTTGG CGGTTATTTT GAAACAGAGT GGGATGAGAT TTACGCGCCC 
    ATTTTCCTTT TAGTGATCGT GTGCTTGGAA GTTGAAGATT ATTAAAATAA 
    TAATAATTGT GAAGTTTTTT AAATTTTGTG AATATCTACA CTTTTTACAA 
    TAGCTCCACT ATGAAAACAA ATTTCAATGT TTAATTATCA TTTTCGTTGT 
    CATTGAACAC ATAATAATGT GTTTATGTCA GTTGGTAAAA AATGATCTAG 
    AATGGTTTTG CTTGTATTTG TAAGATTGTG CCTCGAATTC CTATCAATAA 
    TAAAGAAAAC AAGAAGAAAT CCCTGTCCCC GTTCCATACA AATACCAAAT 
    AAAAAAAGAC AATAAAGATA GGTAATCTAG AAGATTCAAG AGGCCTGTAA 
    CGATCAACAC AACATAAAGA CGAATGAGCT TACTTGATTT TTTGGCATTT 
    AACCACAAAG ACGAGCTTTC GCATTTTGAC TCTTTCATAT CTTTAAATAA 
    TAAAAAATAA TATTGAATGA GAGACAAGTT TAAAACTTTA TATTCCATAT 
    CTGTTTCAAT CAGTATTTGG GTCTTTTTTT GTTTGAGCTG TACGAGATGA 
    AATTCTCATA TACAGTTCTT GGAGGGGGAG TAACCCTTGG TTTACCTATC 
    TCAATAAAGT TTATGATTGG TTCGAAGAAC GTCTTGAGAT TCAGGCGATT 
    GCAGATGATA TAACTAGTAA ATATG

AT4G20790.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23950.1); Has 22866 Blast hits to 21354 proteins in 341 species: Archae - 0; Bacteria - 11; Metazoa - 712; Fungi - 3; Plants - 21851; Viruses - 23; Other Eukaryotes - 266 (source: NCBI BLink).
Link
InterPro Scan - TAIR