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54-4161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8851526 [Map]; Strand: w
      • AT2G20562.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana p...
        Distance: -597; Region: promoter
    Flanking Genome Sequence: 54-4161-1 - 5-prime edge 
    TATTTCATGC TGGGAGAAGG GATTAATNAA CACCTCACCA ACTAGTAATA 
    AAAAAGGTTG CATTGTATAA TGATATTANG CAGAGAGCTT TGTAATCCAC 
    CTGCTTCTTG TTAGCCATAG CCATAGCCAT AGGTACNTTT CGTTAAGCCA 
    TAGCAATACC AGGAGCTACA CAACAAACCA CACGAAATTC ATGATAAGTT 
    TGACTTTTAA AATCAATAAT CAAAGAATCA ATCATAAAAA TTTATGCAGC 
    AGATGCAGAT CCAAAAACAT TACCAAATCA GTTATGATTT CCCTTGATGT 
    AAAATAAAAA TAAAAACAAA TTCTGATCTC CTTTGGTTTT CGGTTTCGTT 
    CGGTTCATGG GGTTCGATTT GGATGAACCG AACGGTTAAC CAAATCAGAA 
    AGAGGAAGAT TTTCGTTTTA CATAAAACCG GTTAACGACG TTGGAACCGT 
    TTCACTTTGA GGCCATAGTT ATTCACGAGA TCTAAAATGT TTATTTTGGG 
    CAGATCATAG TCTATCTCTC TAGTCTCTTC ATCATCAAAC ATTTGGTCTT 
    TTACTATTTC TGGCCCAAAA TTTTAGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8851410 [Map]; Strand: w
      • AT2G20562.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana p...
        Distance: -481; Region: promoter
    Flanking Genome Sequence: 54-4161-1 - 3-prime edge 
    ATGAAATAAA TGTGGAATCC AAAACAGAAC ATTTTGAAGA CAAAGTTAAT 
    TACAATGATT TTAATAATTT TATCTTCTAC TGTATTTTAA ACTAGCTATG 
    TTAAATCGTG GGGTACGTAT GTATGTTCCC ATCACATTTT GATTCCTTTT 
    GGTGCTTGTA AATAGTTTTT CATATTTCAT ATGACAAAGA GTTTTATTCT 
    ATAATATTCT CTAATGTTAC ACCCATGTGG TTGCACAACN TTGCAGTTGC 
    ATCTTCCCTT TTAAAAGTTG TATTCTTCTC TGAATAAATT CGGTCTTAGA 
    ACTCTTCCAC AAGCCACAAG AGGAGCATTC ATTTGTTGAC AACTTTGAAA 
    AAGGAAGGTT CCAAGACAAC TCAAAAGTCT TGTAGTTTCC CCAAAATAAC 
    CCCGTTGACT TCAGTTAATA GATGCTAAAC AAATAGAAAC CGGAAGGGTA 
    TTCTCGTATT TCAGAAAAAC CCGCCGCGTG GGTTCGACGG TTACGACTCT 
    CTCAACTTCA TTCATTCATT TGAAAAAAAC TCACTTTTCT CCTTTTAATT 
    CTCTCTTCCT CTTTCTAAGA AACCGAACCA AAAAAAAAAA ACCCCNCCTA 
    AAACCTTNTT TTTTNGTNTT CCAAAAAGGG GAAATGGGAA ACCCTTTGGG 
    TTTTTTAAAA GAACNACNAT TNGGNTTTGG NGGGNNNNNG NNCCCCCCCC 
    CNNNGGGGGC

AT2G20562.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR