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54-4223-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3057966 [Map]; Strand: w
      • AT3G09940.1 - [+] show detail - monodehydroascorbate reductase
        Distance: 0; Region: intron4 (CDS)
      • AT3G09940.2 - [+] show detail - monodehydroascorbate reductase
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 54-4223-1 - 3-prime edge 
    AGCAGTACCC TAACTGGTAC AAAGAGAAAG GTAATGTTTT GTTTATGTCT 
    TCTCCGAGAA ATCTCTGTGA TTTCACTTGC AATATATTTG GTGATCTGAG 
    ATATTCAAAT TTTACAGGGA TTGATCTAAT TGTGGGCACA GAGATAGTCA 
    AAGCAGATCT TGCTTCAAAG ACACTTGTTA GTGATGATGG CAAAATTTAC 
    AAGTACCAAA CTTTGCTAAT TGCAACCGGT TCTACTGTGA GTAAAATACT 
    TATGATCTCG TCCTCTCTCT TTCTGTTCTT TGTTCTTAGT TCATCTCGAG 
    AAACTCTAAT ATTTTTTGCA GAACATAAGA TTGTCAGAAA TTGGCGTCCA 
    AGAAGCAGAT GTTAAGAATA TATTCTACCT AAGAGAAATC GAGGATAGTG 
    ATGAGCTTGC CTTGGCTATG GAACTATATG TGCAAAGGGG AAAGGCCGTC 
    ATCATTGGCG GCGGTTTCTT AGGGCTTGAG ATAAGTTCTG CTCTAAGGGC 
    TAATAATCAT GAAGTGACCA TGGTTTTTCC AGAACCTTGG CTTGGTAAGT 
    TGATACTTAA CAAAAAACAT TTTAGCTAAA TAATTACACT GTATTCGTAA 
    CAGATTTTCC TCTGTTTTAT CGTTGTATAG TACACCGGTT TTTCACCGCT 
    GAGATAGCTT CATTCTATGA GAGTTACTAT GCCAACAAG

AT3G09940.1

Model type
Protein coding
Short Description
monodehydroascorbate reductase
Curator Summary
Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational Description
monodehydroascorbate reductase (MDHAR); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to jasmonic acid stimulus, regulation of symbiosis, encompassing mutualism through parasitism, response to water deprivation, response to salt stress, response to symbiotic fungus; LOCATED IN: cytosol; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 31567 Blast hits to 31505 proteins in 3041 species: Archae - 687; Bacteria - 24961; Metazoa - 895; Fungi - 665; Plants - 718; Viruses - 0; Other Eukaryotes - 3641 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09940.2

Model type
Protein coding
Short Description
monodehydroascorbate reductase
Curator Summary
Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational Description
monodehydroascorbate reductase (MDHAR); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to jasmonic acid stimulus, regulation of symbiosis, encompassing mutualism through parasitism, response to water deprivation, response to salt stress, response to symbiotic fungus; LOCATED IN: cytosol; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR