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Mutant Lines
54-4239-1

54-4239-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 329040 [Map]; Strand: w
  - AT3G01980.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -9; Region: promoter
  - AT3G01980.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -9; Region: promoter
  - AT3G01980.4 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -9; Region: promoter
  - AT3G01980.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -9; Region: promoter
Flanking Genome Sequence: 54-4239-1 - 5-prime edge
```
TCTGTGTGTT ACCAAAACGG CGAAACAAAG CAAATAATTA ATGCCTAACC 
ACATGATCCA CCACGTTCTA TTGTTACCTT CTTTAATTTG TAGATAGAAG 
AAGATGGTGA TTGATAACGG AGATGTATTT TTTTCTTTAA TAAAAAGCCC 
ACTTCAAGGC CCAGATCCAT TTCTGTACTT TGTAGGTTTT CCAACTTTCC 
CGGCGCCGGA AGCAAGCGTA AGTTATCACT GTTCCCCAAC CAAATTCCAT 
CATATCCTAT TATCCTACTA CTAATGGATC
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 328924 [Map]; Strand: w
- AT3G01980.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G01980.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G01980.4 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G01980.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon1 (5UTR)

CACACAGACA CAGTTCCGGT AAGAGCTTTT GCAGCCACTC TTTATAGTTA 
TTTAGAATTG GCGATCGAAT CAATCTCACT CCCTCCCTCC CTTAAGTCTT 
GTTGAATCTG CTGAATTGTT TTATAAAGAG TTACNTTTGG CAAAATGGAA 
AATCCGGCGA AGAGAGTGTT GATGACATCC AACGGCGACG AGGTGTCCCG 
AAACATCGCT TTCCATCTAG CCAAACACGG TTGCAAGTGA GTCTCTCATT 
TTGTCTTCTT TCCTCCTATC CTGTGTTTCT TCTTCTAGCC CCGATTTGTG 
TTGTGGTTGA CTTTGGTGTC TATAGTTAAC CTTCAAAAAA TGCAATGTAC 
TGTTGCTAGG TTGGTAATGA TGGGAAATGA GGGTTCCCTA AGGAGCATTG 
TAGACAAGAT TAGAGATTCC ATTGAGGGAG CCTTCCCTGC CGATGTTATA 
GCACTCGACA TGGAATCTGA CTCTGAAGTT GCTTTTCATG CCGCTGTCCA 
AAAGGCATGG GAACTTTCCG GCCATTTCGA TGCTTTTCTC AACTCTTATA 
CCTACCAAGG TTTAATTTGC TTCTTGTTTT TCACTACCCT GCCTTTGATG 
CTCTTGTGTG TTGATCATTC CTTTATTCAA CAATCTTTCT TTCTTGCAGG 
AAAGGTGCAG GACATTCTTC AAGTCTCTCA AGATGAGTTC CACAGAATCA 
CNAAAGATCA AT

AT3G01980.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01980.2

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G46170.1); Has 521 Blast hits to 521 proteins in 203 species: Archae - 4; Bacteria - 319; Metazoa - 7; Fungi - 24; Plants - 123; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01980.3

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.1); Has 42855 Blast hits to 42845 proteins in 2927 species: Archae - 336; Bacteria - 31027; Metazoa - 1001; Fungi - 1707; Plants - 1092; Viruses - 0; Other Eukaryotes - 7692 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01980.4

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link: InterPro Scan - TAIR