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54-4244-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23443085 [Map]; Strand: w
      • AT3G63480.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: 0; Region: intron5 (CDS)
      • AT3G63480.2 - [+] show detail - ATP binding microtubule motor family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-4244-1 - 5-prime edge 
    CATGGACCAC TCTTGGAAGA AGTCCTTTAT TGTGCTCATC ACAGTCCTGG 
    ATGCCTGGTC CCTGAATCAA TCGAAGAAAA CCAAAATGAG CCAGAAGAAG 
    GAATGGTCCT TGTGCTACAG GAAGAGGTAT CAAGTTGAGT TAGGTGACCT 
    CCATGGAATA AGTCTTCCCA GCCCCTGTCT GCATAGTATA ACATGAAACG 
    ATCAAATTGA GATCAAAATC TGCCAAATTA AGAAAAAGAC ATTAAAAGCA 
    TTTCCAGATA AAAGAGATCA GGAGAAGAAC AAACCTGTCC ATAAGTGATG 
    ATTGTTCCGT TTATACCATT TACAGCGTCT GAAAGTAGTA GTAGTAGTAC 
    AAAGGTAAAA GATGCAAAAG ACAAAGGTAG GAGGAAACCA AAACCAAAAA 
    TGTTGATTAC ATTGTAAAAT CATAAGATTG GTGCTCAAAT GTTTAGATCT 
    AAAATCCAAA AGAGAAGATC AAGGAATCAA TTAGTACCTC TCATGATGGG 
    GAGAGCCAGA AACTCATAAA CCGCAGCTTG GGTAGAGTCC TCATAAAAAA 
    CTCTATCGAG GCTAAATGTA AATTCATCTT CCTTGTCATC CTACACGCAA 
    GTAAAAACGC TAGATAGAGT TTGAGAGACA AAGAGAGAGA GACAATTTTA 
    ATCAAGCACA CGGCGTCGAG TAGACNAACT TGGAAAACGA AGGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23438456 [Map]; Strand: c
      • AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
        Distance: -18; Region: promoter
    Flanking Genome Sequence: 54-4244-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    ACCCACACAC TCGTTTCTTC ATTTAACTGT CTCTTCTTCA AAACCAAAAC 
    CAAAACCAAA ACCAAAACCA AAACCTTCTA TTGTTTCCCT CCCACGCTAT 
    AATTCATAGA CATAAGAGAA TGAGGAAAGG ACAGGGCTAC TCCTACTCTG 
    TAATCGCATC GGTGTTGGTG TTACTGTGTG TGGTGGTGTC TCGAATCGAA 
    TGCAGCAGCC AAGTGCACGC CCTGAGCCGT CTTTACCTGT CTAAGCGAGG 
    GGTTGGTGGT TCGTCCACCA TGGACACAAG CCATTTCAAG GCGGTTAAGG 
    ATTTGAAACC GTCTTCGCTG CGGAGTGCTG CTAATCAGGA GGGGTTAAGA 
    AAGAGAGATC TGATACGGAG ATTGCCCGGA CAGCCTCCCG TTAGTTTCGA 
    TCAGTACGGC GGCTATGTTA CCGTCAACGA ATCCGCCGGG CGTTCCTTTT 
    TCTACTATTT CGTGGAAGCC TCTAAGTCTA AAGATTCTTC TCCTCTGCTT 
    CTCTGGCTCA ACGGCGGTAC GTTTCCACTG TCCACACGCA TACGTATATA 
    TATTTCTTTT ATCTTGGTTT GCATCTTTAG TTAGGGGCAC TGCATTATGG 
    GTTTATATCT GTACATCTTA TTTCTGAGTT CCAAGATNAA CAAAAAATGT 
    TNNNTTTNNA NNAANNAAGG GGGGNNNTNN TTTNNTCNAN GGNNNAAAAA 
    NNAAAAANGC

AT3G63470.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 40
Computational Description
serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63480.1

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63480.2

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink).
Link
InterPro Scan - TAIR