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Mutant Lines
54-4248-1

54-4248-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26464186 [Map]; Strand: w
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 55; Region: intergenic
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -1986; Region: intergenic

CTNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCAA TCATTGGTTC AGCCGACACT ACAGCTAAAA 
TAAAGAAAAA CTATGTGGTT CTCTGTTGTT ATCAACATAA ACCACTGTAC 
TTGGTCAATT GATACATACA AGATGAATCT ATTGATAAAG AATTTGATAT 
CCATGAGCNT GTATTTTCGA CATAGACCTG GTCTCAATTA ACAAATATAT 
ATCTCTTTAT TAAACCATCC AAATTTGTCT ATATCTAGGG TGATCATATC 
CATTATACTA TTATGCATCT CTTTCAATTT TGGTATTGGC CGGTGAGTCG 
GCTCAAATGT TTTAACAAGG CAATGAAATG TATAAATAAG GTTTAATTGT 
GTATATACAG ATGCTCGCTA AAAGTTATGT GAGATTATAT TGGTGAATT

3 prime edge [+] show sequence

Chromosome: 5; Position: 26464182 [Map]; Strand: w
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 51; Region: intergenic
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -1990; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
AACTCAACTT TTCACTAATC TATTATGTTC TAATGCAAAT GTCTAATCTT 
GATATCGGTT AAGTCCGGTT TTTATTTTTA AGTGTTTAGG ATAGACTACA 
ATTGAAAGCC TTTTTTCACA ACAAGCAAGA GAAGATAAAA ATGAAAAGAG 
TCATATTCCG ATTACACTTT TAGTTATTGA AAAATAACAA CAAGGTAATA 
ACAAGAATCA GATTTGTGAA TCTTCAAGCA ACAACAAGAA AAAAAAAAAA 
AAAANGGNNN AANNTTTGGG GGTTTTTNNC CCNCCCCCCA AAAAAAAANN 
TNAAACNGNN CNNTTTTTTN CCCNGGAAAN TTNNNNNNNT TTNCNNGGGG 
GGGGGNNAAN CCTTTNAAAN CCCNNCCNNC GGGGNANNGN TTTTNGGNCC 
CCNAAANTTT TTTTTTTTNN NNGGGAANNN NAAANTTNGG GGGNTNCCCC 
NGAAANNNAN GNNTTNCCCC NNTTTTTTNN ANTNCCNNAA AAAANCCNNN 
CNAAAACCCC CCCTTTTTTT NCCCCCTTTC CCNGGGGGNA NTTTCCCCNN 
NNNTTTCCCC CCCNGAAAAA AGGGGNTTTT CCNTTTNAAA ANNAAANCTT 
TNNNTTTTGG CCCCTGGATT GGGCCGGTTT NCCCCCCCCC GGNGNGTTTT 
NCNCCCTCGG GGGTTTGGGG CCCCNCAAAA NAACCNGNNG GGCCNNCCCA 
AAATTTNNAT TTTAN

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link: InterPro Scan - TAIR