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54-4254-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23406782 [Map]; Strand: c
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 54-4254-1 - 5-prime edge 
    CGGAAACATA ACACGACACT ACTAAATTGG TTCAAAATGT TATGTTGATG 
    GCTTAGGAAA ATAAAGGAAA AAGAATTGTG AATTTGAGCT TTGGGGTAGC 
    CATTGGTGAA TAGTAAAGTG TAATTTTGGT TTATTTACNT TACAGCAGTG 
    GCAAGGGTAA ATTACACNTG TCTGTACATT TTAAAGCTAC GTCGTCTGTA 
    CATTTTAAAC TAAGTATGTA TGCTAGAAGT ACACNTGTCT TGAAATAAGG 
    GTTATAGTAG TTCGTTTTGG TCAAACTTGT GAAAGGTATA CTTTGTCTTG 
    TAATTGAGTG AGAGACACCA TTTTGGTATT AAACTGTTTT CCTTTTTATT 
    AAAACGTTTG GCTTTGCACA GTCTAAGTTC TTTGAAACAC TAAAACATGA 
    TGCACCTATG ATAGATCTAG AGCGCAAAAA CATGAGAAAA ATAAAGTGGA 
    GAGTGTGTCA AAGCAGGGAG AAAACAGAGA GCCTTACACC GGTTTCGTGT 
    AGTCAACTGT GTGCGTTCGG GACTCTTATT TTTCTTTCAA TCGGCATGTG 
    GAATGCTTCA TCAATGAATG GTCCTAAACC AGGAAGGAGT GAGGCTGTCA 
    GAGCATGACC TAGCTTGGGT TTAAGCAATA TGTTTCCACA TTCATCTCTT 
    AACCAAAGAT AGATCATGCT GGCAGCTTCA CTTGTTCCCT TGTGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23406904 [Map]; Strand: c
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 54-4254-1 - 3-prime edge 
    CATAGACGTG AACTGAAAAG CCAACTTGTT GCAGCAGTTT GAAAGAACTT 
    TGAAGCCAGT GACCATAACC TCGTGTTCCA CGACTCTTTT GATCAGAAGC 
    ATCTCTTGGT GGGGAACCAT CAAGGTTTCA GATTTGACCC TTTTGATCGT 
    TCAAGGGAGC TGGAAGTTAT CTTATCAGAC GAGTCCCACT CTGTGCTCCT 
    GATCATCAAT TATCCAGCCA TCCGTAGAGA ACTGCATCTG CTATGGTAGG 
    CTTCTCAAGG TTTCTTGAGA GATGGGCTTC TTGAACCCTT AAATAAGGAT 
    CTTGGATTCT TAAAGTAACT GAGGAATGGT GTCTCAGAAA CAGGTATGAA 
    TTTTGTGAAA AAGCCGATCG GCCATGAAAG GGATGCAAGT GCTATGCAAG 
    TTCCCCATTG CCACCCGTTA AGCCTTACTG TATCCGCAAA CTTCTTTAGG 
    AATT

AT3G63380.1

Model type
Protein coding
Short Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink).
Link
InterPro Scan - TAIR