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54-4265-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2555785 [Map]; Strand: w
      • AT5G07980.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: -266; Region: promoter
    Flanking Genome Sequence: 54-4265-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT GTTCCACATG ACAATCTTTT CATTACATTA 
    TTAAAAAAGG TAGATCCGAT TTTTATAATC TTTTCATAAG ACTTTCCTAG 
    TCAAATTATA GATACTCTTT GACTAACTTT AAGTAAGATT ATGGCATCTT 
    TTATAACNTT ACTGCCACAT TATCACATAC TTTTGAATTG TTATAAGGGA 
    AATTTGTCTT TCTTGGAAAC TAATAAACCG AATATTGTTG CTGATAAACT 
    GTAAATTTCA GGTCAACACT CTCTTATCAT AGTATAATAT AAATACTTTT 
    TAATATAAAT TAGAATATAA CTACTTTCAT CCAAAAAAAA CTGAAAAGTA 
    GAATATAATT ACTTTCATCC GAAAGATTTT GCTTTATAAG CCTAATTGCA 
    ACCGTTTCTG TTTCTTGGGT TTATAACGGT CCTGCTCGGC TGCTCATTCA 
    TCTTCCAGCG TTTGAAGTAT CAAGTATGGA GAGAGTTTCC CTTAAACTTT 
    GTATTCTTTT GGTGGTTTAC GCATAATGAG ATATCTCATA TTGTTTTCAA 
    CATCGTTTGT TCATGAGTGA CGAGTCATGA CATTAGTTGC AACAGTTTTT 
    TTATGAACGT TTTGTATATT TTCTATAAGA AGGTGAAATT TATTTACATG 
    CAAAAGTATC CGACAGTCAC ATTTTGATAT CTTAGCACTA TGTTTATTTA 
    TTTTGAGCGA AAAGTATTTT TACAAGATTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2555776 [Map]; Strand: w
      • AT5G07980.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: -257; Region: promoter
    Flanking Genome Sequence: 54-4265-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCTCTT 
    TTATACGATG CTGTTTTAAC ATCTTAGGTG GTTCCCTAGT TAATTAAATG 
    GTCCGTCACT TGCCCCAAAA CCAACTAGTC TAACCTTCTG TCTTTGAAAG 
    AGAGTTCTGA TCTACGACCC ATCTCCTTCG TACCCGAGCC TGAAATTTAT 
    CTTCCGGACC CGAGCCTCGG ATTTGCTCCT GCGTCCGCCG TTGAAAATTT 
    TCGTACTCCC TTCGATCACT TATCTCTCTT TCTCTCTTCT CCTGGTTTCG 
    TTAATTATCG GATTCGAAAA CCCTAACTTA TTCTTAGAAA TTGAGGTCGG 
    AGAAGAAAGC T

AT5G07980.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR