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54-4266-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21474280 [Map]; Strand: c
      • AT1G58037.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G58037.2 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4266-2 - 5-prime edge
    TTTCGAATGC ATCATCCAGC CAGACATCAT CAACCATCCG CGTCACTCCA 
    AACATCCTCT CAAGAAAGTC TTGGCCGAGA CAATTGACTA TACAGATGGT
    AACTGTCATT TTTGTCGAAG ACCACCTTGA TGAGGTGATG TATCATTGTT
    CCATATGTAA TATCAGCATA GATTTAAGCT GTTGGATATA TCCCCCACCA
    TTTACTATTT ATCAACCAAA GAGCCACAAC CATACATTCA CCCTCATGGC
    GAGAAAGGAC TCTTTCACTT GTAACGCGTG TGGGTTGGTT GGTGACCGTA
    ATCCTTACGT TTGTCTTGAA TGTGATTTCA TGCTACACAA AGATTGTATC
    GATTTGCCCA GAGTCATAAA CATAAATCGT CATGACCACC GCATTTCTCG
    CACTTACCAT CTCGGTCACG GTGATTGGAA ATGCGGAGTT TGTCGCAAAC
    ATATAGATTG GATCTTTGGA GGTTACTCTT GCAAGCGTTG TCCTAGTTAT
    GCTGTTCATT CAAAATGTGC AACAAGGGGT GATGTGTGGG AGGGAGAAGA
    ACTAGAAGAT GAGCCTGAAG AGGAAGAAAT TGAAGATCCA TACAAGGTAA
    TTAATGAAAA GAAATCCTTC ATTTCAGTCA TGAACATAAT CTAAGACTTG
    GGGATGATAA TGCTGCCGAT NATGAAAAGT GTCACGCTTG CGTTTTTCCA
    TCAATTCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21474396 [Map]; Strand: c
      • AT1G58037.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G58037.2 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4266-2 - 3-prime edge
    ATTCGAAATG TGCGCGGAAT TTGCAGATTT TACAGTAAAT GGCGTTGCCT 
    TCCGTGTCAC CACATCCATC GCATGGAAGA TACTCATGGG GGTCTCCACT
    TCCAGTATGC ATCAGCCACC AGGAAACTAA CGGATGACNT GCAGGGAATC
    TTCACTCTAG GTATACGAGA TATTTCGTAC TCGTACATGT CCATATTTGG
    TCTCGGATCG TTTTATGTTT GTTAGGTGAA TACCAAAAAA CACAAGTTTG
    TATTTTTCTC AGACTTCCTT TGGTAACTCG GACTCCTTTT ATGTATTTAG
    GTCATACACG AATAATGTAA CCAGTGACCT GATGCCAGGT CATATACTAC
    TTTAATATTA CCTAATTTCT CTTGATTGAT GATACTCATT GACCTTACCG
    ACACTACCAG CTCATCCTCA CATATCTCAA TACAGTTAAC AGTTTCATAG
    ACCCTTTTTT ATTAGTCTAG CTATAGCTGG TTATTTTTTT TCTCCTAAGG
    GACAGCTGAG CTAACGGCAA TCATTTTACT ATTTTAGAGT TGGATCTTTA
    TGCGGGGTGC AAGAACGTGG CTTGAATCTT TCCATTACGA TTTTATTCAT
    AATTGGTTAT ATAAAAACCT CATCTATTTC ACACAAAAAA ACAACAACGG
    TGATTCCTTT TTTCTTTTTG TAAGAGTTAT TCTAACTTAA TAATCAAGTT
    GTATCCAATG GCATCTTTTT ACACAT

AT1G58037.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G45730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G58037.2

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G45730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR