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Mutant Lines
54-4271-1

54-4271-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26598039 [Map]; Strand: w
- AT5G66631.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

CCTGACAGAG AGACGAAAGA GCTGCTTGTT AAGAGTTTGT GGAGAGAAGA 
GAAGCGAAAA GAAGCGGCTG CGGTTGAAGA GAGCTACGAG GAAGAGAATG 
ATAACAAGAA TAGTAGTAAC NGTTTTGCNG TTTGGCGTTG AAGGGTCATG 
TGTGGACCAT TAGTTCTACA GACATTTCTC GAGTCTACAA TCTCTACCGC 
GATTGTGTTC TGAAAACTTC GACTTGACAA CATTTATTCT AAGTTTCGTT 
TTTATTGGGC CCAATGATCG TTAAAGGCCC ATAGAGTCTG TTGCTGATAT 
ATTATCTTAA AGCTGGTTGG TAAATTAATG GGTCAACGCC ATTCAAACTA 
GGCAAACAAG AATATACAAC CGTGCCTCAC ACGCTCTCAT ATCTTTTCTT 
TGATCGTTGA TAGTTACTTT TTGGTCAGTA TTCGGACTTT GACTATGAGA 
ACCACGTGAA TGGCCCATTC AAATAGGTGT AAGTGTAACA TCTTTTTATC 
CTTTTTTTAA TTAGGATCAT ACTAAATTAA TAACAAGAAT CATAAATTCC 
ATTGGCAATA TTTGCGAAAA CATATAAATT GGCAATCAAA TCATTTGTTT 
TTGAAAATCA GATAGTCAAA ATATTCTATA CTGTATATTG AATTTTGCAA 
CCGAAATCAT TTACACTATA AATCGATTTT TCTTTGNTGA ACCATANAAG 
ATTAT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26597923 [Map]; Strand: w
  - AT5G66631.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-4271-1 - 3-prime edge
```
CTGTCAGGCA TCAGATTCGA ATCTTTCATG TCTTGGAACA CTCTGTAAGC 
AAGCACTGAT CTTTCGCATC TGCAATACGC TTGAACTAGA AGCT
```

AT5G66631.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR