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54-4307-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19684766 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 2375; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 300; Region: intergenic
    Flanking Genome Sequence: 54-4307-1 - 5-prime edge 
    CCCGTTAAGT TCTAGCTGTA AAAGTGATTG ATAGGGTGAA CGGCATTTCT 
    AAAAAAGTTT TTTGTAGCTG CCTAGAGGGA TTAATTCTGT GGTGGTTTTA 
    CTTTTTGTAT TGCAGGCGGT TGACGACAAC GTGTTGGATC TAGCACAACG 
    GCATGCTGAA TACAGTATTG GTTCAGCTTC CTATAAAACA CCACAAAACT 
    TTTTAAATGA CAAATGATAC AAAATTTTAA TTATGAAATA AATTACAAAA 
    ACATATAAAG TTCGACTGGG ACAAGTAAGA ATATTTGAAC CTCAATTGTT 
    CAATTTCATT CTTAAATGGA GCCTCAAATG GGGAACTTTT AGTATATATG 
    TGTCTTAGAA GAAGCAGAGT TTACGCATGT ATTCATTTTG TTATCATACT 
    GTTTTTATGT TAAATTAGTA ACAAAAGTTT TCATACTCTC TGCTTATGCC 
    AACATTGGTG GTTACTTATG ATTCGTATAT AGGTCAGCAG AAATATGTGT 
    CTCATGTTCC TTGGTCTTCC AATGTGTGAA AGCGGTATGC AAAANCAAAA 
    GACTTGGCGG NGGCTTTAAA ACAAGATCAG CTTTTNATTG CTGCTGCAGC 
    TTCTTGGTCC CTTGCTACCT ATTAAATCNA CTNGTGAAAC TCACACTGGA 
    CAGAGATGTG GACATGATGA NAACCTTGNA ATCCCCATAG TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19684830 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 2439; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 236; Region: intergenic
    Flanking Genome Sequence: 54-4307-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGTTAACGGG TCAGTACAAA CTTCTTTACT CTTAAAGACT TTGGCTTTGC 
    CGCAACATCT TCTGACGATG AGTTTCCCGC CACTCTTCTC TTCCTCACAT 
    TCTCCTCTAC TCGCCTTAAC TAATCCTTGT GATGCNTTCA GTTAATATGT 
    ACTATACATA AATGATCCAT ATTGTAGTAA TCGAATATAT GATATGAGTA 
    ATCAAAGGTA TGATAGTAAT CAAAGACATG ATTCTCTCCT TAATACCCAA 
    AACCACTTTT GTCTAAGGAT TTTGCTTTTG AAATGTGGAG TTGTTGTTTC 
    ATATGCAACC ATAAATTCAG TAATTTATGG CATCAACAAA AAGATAGCAA 
    TACAAACAAA AAACATGTCT CGCTTATGAT CAATCTGGCA CAGCAAGTGA 
    AATGAAATTA CCAAATACAT GAACTCTCAG AATTGGTTAA AGAAAAGAAG 
    AAGTGCAGAC CACCAATACA GCAAACATAA GAAAATGCAG CGGCAAGGGG 
    TCAACATTCC TGCTGGACGA GCCGGTACCA ACGGAGGGAA CTGTCTTGGA 
    ACCACCTCCA ACTCCTGTGT ACCGATGTGC AAGGAGAATG TATTCAATAA 
    ACTAAAATCA ACCGTTGATG GTTTGGTGAT ATATAGTAAG AGGAGTAAGT 
    ACCTGAACGA GCACCCGGCA ATGAGGTTGG GGTTAGTGTC ACATCTGGGG 
    TCTTTTNCGT

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR