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54-4339-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26395518 [Map]; Strand: c
      • AT5G65990.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4339-1 - 5-prime edge 
    ATGAAAACAT CCTGCACCAT AACCACTAAG GTGGCGGCTA CGTCCACGAT 
    ATCGGCGAAT ATACTCAAAG GGGCGAGATG GGTGAGCGAT GGGATGGAGT 
    TGAGACCCAG CTGAAAGGGG AAACATCCCC AGAGGTAAAT GGAAGCAGCA 
    TCGAGGCCTA GAATATGTTC GGTGCCGCGG CTGAGGAGAT TAGCCATTGT 
    GGTGGCGACG AAAATAAGGT AACTGACGCA GAAGCCAGAT TGGGAAAGGA 
    CAAGCATAAC ATCGACGACG AGACGACCGG CAGGGCCGCA GACGGATTCG 
    CCGAGATCTC CGAAAGAAGT GATGCTGTTG AAGCCGGAGA GGGACTCGAG 
    TTTCCGGCGG GTGTGGACGA GGAGCATCAT ACAGAAGAAG GTGAGGGAGG 
    ATACGAAGAG GAGTGTGAGG AGGCCCAAGA GCCATCCAGT CTTCTTGAAG 
    GTGTACGGAA GTCCGAGCAC GCCGGCGCCG ACGATGGCGA TGAAGACATT 
    TGCAAAGGTT TTTGGCTGCG ACGACAATGT TCGAGGCCCC AAAAGAGGAG 
    TGTCTTCCGT CGGCGGCAGC GAATGGGAGG ATGATCCCGA AGGCAGCGAA 
    TGGGAGGACG ATCCCGCTTC CTGATCGTAC CTCATGCCGA TCGAAATTGA 
    GAGTGAAGAA GAGCCGAGAG TCACAGTCTA CGTTAATGGC GATCGATCTC 
    TGATTGGGTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26395634 [Map]; Strand: c
      • AT5G65990.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4339-1 - 3-prime edge 
    GTTTTCATCT TCCTGAAACG AAGACCTCCT TTGAGAGTCT TTGGAGGTGT 
    CTCTGTTTTC TTCTACGGAT TGGGAGTTGC TGTGTACGCA TTTGAAGGGA 
    TCGGAATGGT AAGCAGACCA ACTAATTCCT CTACTGTCTC TGTATCTGGT 
    GTTAAAACTA ATAGTCCTGA TTTGTGGTTG GATGTGAACA GGTTCTGCCA 
    CTGGAACTAG AGGCCAAATA CAAAGACAAG TTCGGTAGAG CGCTGGGGCT 
    AGCCATGGGC TTAATCTCGA TCATGTACGG TGCATTCGGG CTGCTAGGGT 
    ACATGGCTTA CGGAGAGGAG ACGAAAGACA TCATCACCAC CAACCTGGGG 
    ACAGGAGTGG TGAGCACTCT GGTGCAGCTG GGCTTAGCAA TCAACCTCTT 
    CTTCACATTC CCCCTTATGA TGCAACCTGT CTACGAGGTC GTGGAACGCC 
    GCCTTTGCAG CTCCCGTTAC TCTGTATGGG TGCGCTGGGC CACTGTGCTG 
    GTGGTCACGC TCGTGGCCCT GCTCGTCCCA AATTTTGCAG ACTTCTTATC 
    TCTGGTGGGG AGCAGCGTCT GCGTGGTGCT GGGCTTTGTC TTGCCATCAC 
    TATTTCACTT GCANGCTTTN AAAACAAGTT GANCTCACAA GAATAGTGGT 
    AGACGTTCTC GTTTCCTCAT TGGGGTATGA TAGCCTTACC GGGACCTGAC 
    TGCAGTCCAT GAAAACCTGA CTTCCAAGC

AT5G65990.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR