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54-4348-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 486219 [Map]; Strand: c
      • AT1G02400.1 - [+] show detail - gibberellin 2-oxidase 6
        Distance: -582; Region: promoter
    Flanking Genome Sequence: 54-4348-1 - 5-prime edge 
    ATATTTAATA TTGATTTCTT ATTTCAATGA ATTAAGTATA CAATATAAGT 
    TAGATCAATT ATTGTTGTGA TATATTAAGA TTGACAATCG GAGGAGTCCG 
    ATCTTAGATA TTATATTGAC AAGTTTGGCA AAAAAAATAA AATTATTATT 
    TGTTCAAATG AACAAGTTAT AAAAAAAAAT GCAGTAGTTT CAAGTTTGGT 
    AAAAGAAATA TGACAAACTT AAACTTGAAA GTGTCAGTTT TGTATCAGCG 
    TTGACAAATA CAATACTTCT TTCTCTGTTT GAAGTTAGAG AGAACTAATT 
    AGGTGTCTGG CTAACAAAAC ATGCATCACA ATTATTATTG TTAATTGTGA 
    CCAACAAAAT GCAGTACTAA AACATTTCAA GATTTGTCTT TCGTAANATA 
    NATATTTTAA CTGTTTANAT TTATAATATT TTTTCTGATG AAGAGGCAAA 
    TAAAAAGAAN AAGCAAATGC TAGAAGAGGC GCGTGGAAAA GAGTCACAAG 
    GAAGTGGGAA AGGTGAGGAG GATGGGGCAT GTGTAAGGCT GATATGTCGG 
    CACGTAGTGG AAATGGTCAA CCTTGACGGC TCCCATTAGC CGTCCGATTT 
    AACTAAAAAG ACTCTTTTCA TAGCCCATAT TCTTTCAATT ATTATTCTCT 
    CAACTCTTTC TCTACCAATA CCTAGTACCT ACCCACTTTT TTACNAAATT 
    ACATTCAAAA GG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 486335 [Map]; Strand: c
      • AT1G02400.1 - [+] show detail - gibberellin 2-oxidase 6
        Distance: -466; Region: promoter
    Flanking Genome Sequence: 54-4348-1 - 3-prime edge 
    TTAAATATAC GCGAGTCTTA TGACTAACCA AACACGGTGA TTTAGGCAAT 
    AAGTGCTCAA TCTTTCAATT ATTTTAAGAA TTGAACATCA ACATCATCTA 
    CTACTTTCCT ATCACCAAAT TTCAAACTAC CCGATTTTAA TAGTAATAAC 
    TAGGTTACGC AAGAATGTTG ACAATAAAAA AAATGTATAA CACAATTTTT 
    AAGATTTTTT TTTTTTNTNG NNTNANAAAA ATNCCTAGTT GGAAAANGNC 
    TANACNGNTT TAACCGTANT TTNANTTTNA AAAAANTTGG NTNGNCCANN 
    TNAAAANCCA NTTNANGGGN AANNNNCNNN CTNGTAAAAT TNCNTTTTTN 
    GNAAANAANA NNTTTNTTNN TTTGGGNAAN ANTTTGGGTT TNAAANAACT 
    NNNCCGNCCC CNTNGNNNAN NNNCCCCCCT TNCCCAATTN GNNGGANNAA 
    AAAATNNNTT TNANTNCCCC CNTTNGNNAN CCGTTNGGAA NCCGTAAANT 
    TNAAANCTAA NTTNCAAAAA AGGNNTTNNA NTTNAAAANA TTANTTTNAN 
    CCTNCNTTNT TTTCCNANTT CCANTACCNT TTTTTTNNAA NAGCTCGNAA 
    CTTTTTTTTN AAATNNAAAA CCCCCGGATT NNATTCTTTA CCNCNAAAAA 
    NCATTTTAAA AGCCNTTNTN TCCTGGTTGG AAAAAAAAAA AAAANGGGCC 
    TNGGTTTTGC CNTTTTNAAC CCCGTAN

AT1G02400.1

Model type
Protein coding
Short Description
gibberellin 2-oxidase 6
Curator Summary
Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.
Computational Description
gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink).
Link
InterPro Scan - TAIR