1. Home
  2. Mutant Lines
  3. 54-4365-1

54-4365-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19649884 [Map]; Strand: w
      • AT2G48030.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4365-1 - 5-prime edge 
    GCCACTGTGA TGGTTTTGTC CGGGTTTGGG TGGATGGCGG CTGCCGATGA 
    AAAGCCATTT TGATGATGAT GAGTCTCAGG AGAAGAATCA ACTGAGAGGT 
    GGTGGTGGTT GACNGGAGAT TCTGGCNTTT CCGGGGACGG CGGAGACGAC 
    GGCGGAGGAA AGCAATGAGG TTCAACATAC TAAAAAAAGG GCGATCGCAT 
    TTATTAAGTC TAAAACTAGT AAAAGTATAT ACNTTTTGAG TTTTGACAAT 
    GAGAGAGAGA GAGATGATAT AGATTTCCTT TTATACGAAG AAATGAGAGA 
    GAGAGAGTTG TGGAATGTGG AGTTTGCTGC ACAAAAAAGA AGGTCATATG 
    AGCTTCTTGG GAAAATGGTA TTTGGCTTAC GTGGCATTAT CAACTCATCA 
    TCGATGTTAA TAAATGTACC AAATCCTTTT CTTTTTTGTG TGTCTTAATT 
    GTATTTTATT ACTATTATTT TAGAAAAGCC CACCAATCAT TTGGTTTCAG 
    TCTTTTATTT TCCAATACAG AAATCATGAA ATACAGTATG GTATTCTGTT 
    TTTGTTTTGT TNAGGTAAAT CTCGAACTAA AAGTATACAA TTATTATGGA 
    CGTTAAACAA CTACNAAGGA ATAGGTTTAT GAACCATCNN CAGANAANAN 
    AANGGGANCA TTTTCTATTA TTAACG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19649768 [Map]; Strand: w
      • AT2G48030.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4365-1 - 3-prime edge 
    ACAGTGGCCA CCTTTAACGC TGCTATGTTC TCCATGGCTC CCGCCGTCCC 
    TAGCAACAAG GGCTTGCCAT TCCGGTCCAA GTCTACGGTT GACCGCCCCA 
    AGAGCATTCT CAAGCCCATG AACGCCGCCG CATCTCCTAC TCACNGACTC 
    TAGAAAGCAA CAGAGGTTTG CCAAATCCAG GCCTAGGAGA GTCTCCATCA 
    ATCTCCCCGA CAACGAGATC AGCCGCCAGC TCAGCTTCCG GGAGGATC

AT2G48030.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR