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54-4415-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 920474 [Map]; Strand: w
      • AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 54-4415-1 - 5-prime edge 
    TTANAAAACN NNCAAAATCG GTTNTACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GGAGGCTATG GAGAGCCCAG GTACATCTCA 
    AGAACAGAAC AAAAGCCTTA ATCTTTCTCA GTTTTTCACA GTCTTGATCG 
    TCTTAAATCA TTTTGTGCAG TACTTGTGAG CCTGGGACAT TAGGGGAAGA 
    TAAAGTGATG GGGAAGGTAG TTTACTGTGA AGCAGGACGA GAAGAAGGAG 
    GCAATGGAGG TCAAGGTCAA GACCATGTTG TGAGAAGTTT AAAAGGAGCT 
    GGTGTGATCG TTCAACTTCT AGAACCAACT GATATGGCTA CTTCAACGCT 
    CATTGCTGGC TCTTATGTTT TCTTCGAAGA CGGTACAAAG ATCACTGAAT 
    ACATCAACTC CACCAAGTAA ATCAATCAAT CTCTTCTCTC TATGTCTTAC 
    TTCTATTATT CTTGCTGTTC CTAACTCTTA TCGAACTTCA CAGAAATCCT 
    CAAGCGGTTA TCTTTAAGAC AAAGACAACC AAAATGTTAG CTCCATCGAT 
    TTCTTCCTTC TCAGCAAGAG GACCTCAACG AATAAGTCCC AACATTCTCA 
    AGCCTGACAT ATCAGCGCCG GGACTAAACA TTCTCGCAGC ATACTCGAAG 
    CTAGCATCGG TAACCGGTTA TNCAGACGAC AATAGACGAA CACTGTTCTC 
    CATAATGTCA GGAACGTCAA TGGCTTGTCC TCACGCACAG CTGCAGCAGC 
    TTATGTCAAA TCATTNCATN CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 920426 [Map]; Strand: w
      • AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 54-4415-1 - 3-prime edge 
    AATTCCTGCA GATAAGTTAG ATGCAAGCGA ACCGCTTGTT AACGGATACA 
    TTTTCTTTCT TGGATTAAAT CCGTTTAGAG ATATTCCCTG CAAAAGAGAT 
    CTTGTAATCT TATGGTACTT GCCATACAAG CAAGATTGAG ATGATACNTT 
    CAGCTCTTGA AAGAGAAATA CTTACAGATG CGGTGAGTCC ATTTCCAAGT 
    TTGACAACAG TTTCAAACTT CCGGTCGAGT GAGTTAGCCG CGACTGTCAT 
    TACCCACGGC GCGAGGTTCG AAACCGTAAA GAGACCAGGA CCGTTATTAC 
    CTGCGGAACA CGTTGTCAAG ATCCCTCTTT TCATCGCGTG AAACGCTCCA 
    ATAGCTATTG GATCTTCGAA AAACGGAAGC GAGGCTCCTC CAATTGAAAT 
    CGATATTATA TCGACCCCAT CAGAAATCGC CTCGTCGAAT GCTGCCAACA 
    TGTCCATGTC TGTACATCCT GAGTCCCAGC ACACCTTAAT TTGAAACAGA 
    GGATAATGTG TCTCAGATAT TCCTTATGTT CCAAGAAAAC AGAGTAATGA 
    TATAACGAAG AAAACAAACC TTATATGCAG CTATTCTAGC AGAAGGAACA 
    CCACCTCGAG CTGTTCCGTT TGCAATTCCG AAAAGGCTAG CGCTGGAGAC 
    TGAAACACCG GCAATTGTGG AAGATGTGTG AGTCCCGTGA CCATCGTGAT 
    CTGCTGCAGA GTCTNCCTCG CC

AT5G03620.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR