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Mutant Lines
54-4424-1

54-4424-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26457633 [Map]; Strand: c
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon8 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon9 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon8 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon8 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTGT CGACATTTCA GTTCTGAACA ACTTAAGACA 
ATTTGTGAGA TACAGCCGTC TAAAGCAATT TGCTTTAAGG GTAAGTTAAA 
TGAGGAAGTT GTTGGATGGA TAAAAACAAA GTGATCCGGA CATGTCTCTA 
ATGCNTTTGT GTCTCCTTCT GGCAGGCGCN TTGCTAGCAC ACTTGACGAG 
GCAGAGATCT CTGACCTCAG AGATCAATTT GATGCGATTG ATGTGGATAA 
AAATGGCGTC ATTAGTCTTG AAGAGATGAG ACAGGTAAAA GCTCATGATA 
TTTTGCTTTA AGAACATTAC TAGTTAAATC TAGGCATGAT CAGTTAATCT 
TTATGCATCC ATTTGGCCTT TTTTCTACAG GCACTTGCCA AAGATCTTCC 
TTGGAAACTG AAAGACTCAC GAGTTGCTGA GATCCTTGAA GCGGTAGTTA 
TATTTTTGTT TTCCATTGCA ATTGCATCTC TGGGGGTATC AGAGGGAGAC 
GTAGTTTCAT AATGAGCCGT TGTGTACTTG TATCTTTGCT GGTCACAGAT 
TGATAGCAAC ACTGATGGGT TAGTGGACTT CACAGAGTTT GTAGCAGCAG 
CTCTACATGT TCATCAACTA GAAGAACATG ATTCAGAGAA ATGGCAGCTA 
AGGTCAAGAG CAGCTTTTGA GAAATTCGAC CTAGACAAAG ACNGGTACAT 
AACGCCTGAN GAACTTCN

3 prime edge [+] show sequence

Chromosome: 5; Position: 26457692 [Map]; Strand: c
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron7 (CDS)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron8 (CDS)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron7 (CDS)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron7 (CDS)

GATATCAGTA GCATTCCCGC CTTCTCTAAC CCACGCATGT GCTACAAAGG 
CAAGAGACAA AATAGCATTA GTCAAAGAAC CCGCCGCACA TGAAAAAATC 
ACTAACTTTA GTACTCGAAA GCATACATAG TGCTTGTGCA GCAGTTAGCC 
GTGCTCGTGG GTCTTTTACA AGTAACTTTT TCACAAAATC TTTGGCGCTG 
TCACTTATAG TTGCCCAAGG TTTACGGCTG AAGTCAGGTT TATTTCTTAA 
AACCTATATT CATATAGTAC ATATTAGTAA GGAAGTGAGA AAGAAATAAG 
AAAAGCTATA GATAGAAATC CAGTGAAAGA AAGTTTTCAA CTACACCTCT 
TTAAATATAC CATCTTCAGT TCTATCCCAA AAAGGCCGCC TCCCACAAAG 
TAATATATAC GTAATCACAC CAATGCTCCA TACATCTGAT TCAGGCCCTG 
ATCTGCGCTT TAATACCTCA GGAGCCACAT AATAGGCGCT ACCAACAATG 
TCATGGAACC TTTTCCCTGT GAAGGATTGA GTTGTTTATC ACAGAAATCA 
ACAGAATAGG CTCTTAACAC TTACTTTGCT TGTGTGGATT TTGATAGCTA 
GTACTAACCT GGTTTGATAA AATCCGATAA ACCAAAATCC GTAGCCTTTA 
GAGGCGAATC TAGTTGAGCT GATTTGAACA AAAAGTTCTG CAAGAAATTG 
GANGGAGGAG CAAAA

AT5G66210.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.3

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.4

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR