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54-4491-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19651823 [Map]; Strand: c
      • AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon20 (CDS)
    Flanking Genome Sequence: 54-4491-2 - 5-prime edge 
    CTCTATATCA CATTTGTACT AGCGGTGGGG CGTTTCATCA GGCTTCAATG 
    CTCTGACCTG CGTATGAGAA TACCTTACGA GAACCTGCCT TCGTGTGACA 
    GGTAACATTT GTAAACATTG TCCAAGAGTT TTGCTGTTCC ATGATACTCT 
    CAACCTCTAA GAGATTATGA CCACTCACTG TTGAATGTAG ATTAATAGCC 
    ATATGCGAGG ACTTGTACGC GGCTAGAGCA GAGGGTGAGC TTGGAGTAGA 
    AGAAGTTCTA TACTGGACGC TTGTGAAGAT CTATAGATCC CCGCACATGC 
    TGCTCGAGTA TACAAAGCTA GACTATGATG CTTAGGTCCA AAACCAGTCT 
    CTCACACTAA AGAAACACTT TGTCATATTT GTACATACTG AGCGGAATAT 
    TCTGAGGGAT TTGTTTTGTT TTCAATCAGC TTGTAGTTGA TTATTGTAGT 
    TGCGACATAA TGAAAAGAGG AGAAATGAGA GATGGGTTCA AAGAAGCATT 
    CCACATTCAG AAGTCCAATC TCCTAAAAGA CTAAACCAGC CAAAATGAAA 
    AGAGGAGACA GAGCCACACA TCCGAGACGA TGGGCCGAAA CACACATAGT 
    ATAATTGAAT AGTGGGCCGT GGCCCAATAT TAAATAATCA TCCCTTGATT 
    ATTGATTATC TATGACCTCA TAAACGATAA TAATTACTAA TTAGTAGTCT 
    ACGAATGAGA AATATAATAA AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19651939 [Map]; Strand: c
      • AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron19 (CDS)
    Flanking Genome Sequence: 54-4491-2 - 3-prime edge 
    ATATAGAGTC CCCATATACT GAACTTGCTG AGGGTGTCAC CCAGAAAGCC 
    CTCTGCATAT TATTTTCGGT ATCAATAATA GAACATGAGT TATGAAATAA 
    CACTTGAATT AGAAGAGCTA ACTTACGTGG CGGTGTTTCC TCAGACATTA 
    TGATAGCAAC TGGTCCATCC ATCCCCTCGC AAGCGCTGAT ATTTTCAGAC 
    GCTTTAAGAT TATGGAATGA CCACCACCAC TTGAAATTTG CATGGTTAAT 
    GAGTATGTCT GCACTCACTT CATCCGTCTG TAGCAACAAC ATTACAATAT 
    TGGAAGTATA AGCCAAAACA GGAAACATTG TCTGGAAAAT AACTCTTAGC 
    TTGTGCAGAC AAGATTTACC TGATCCTCGA AAGACCTGAC ATCACCAGAA 
    CCAGTAACAC GGAAGAACTT TGGGTACAAA TTATGCACTC TAAATCCATC 
    CATCGACCCA TTGAGAACCA TTTGGATATC AGAGCGTTTT GGAAGGTCCA 
    GAGGGTCGAC ACTTCTTTCA TATTTCACAG TCTCCTTGCC TTTAGGGCGG 
    TCTCTGTTAA GAACCCAAGT AAAGGTGATG TCCATATCTG TGTCCCAGTC 
    AAGGGATTGA ATAAATCTGG TCACAACTGT GTCAGGGACA AGCCATAAAA 
    CACTTGCATC AGCTTGACAG CATATCAGCT GGATGTCATT TTTGTTGTAT 
    GTTGGCAAAA AGCT

AT2G48060.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR