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54-4530-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26483298 [Map]; Strand: c
      • AT5G66300.1 - [+] show detail - NAC domain containing protein 105
        Distance: -1964; Region: intergenic
      • AT5G66310.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: 2387; Region: intergenic
    Flanking Genome Sequence: 54-4530-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTTT TCTGTGATTA GCGCATCTAC TCTGTTTCTT 
    TACCAATCTT CGTATCTCGT ATATCTGATT ATGATCGTCG TACGGTACCG 
    TTTAATGGCG TTACGATTAT TAATGATAGG CATGGAAATG GAAAATCAGA 
    TTTTGATGAA ACCAACCTCT AAAGTTTCAC AAAAATAAAA CGTTACCCTC 
    AAAGGAATAT AAAAGCTATA ATCCCTAAAA CAGCATAAAA CCTAAAGGCA 
    ACACACAGAG TCCTTTGGGA AAGAAACAAT TCACGACAGT TATCGTAATC 
    ATAGATAGAA ATGTTAAGCC GGGACAATTC CTTCTTAAAT ACCAAACAAA 
    AAGTTTAAAA TAAAAACGCA TATATATATA TCATCATTCT CAGATATTTA 
    TGAGCGGCTA AAGTCAAAAC ACTAAGACTA GAGGTTTTAT TGATTTGGGG 
    TTAGGAGTGT GTATAGAGTG AATGATTTTC AATCATGTAA TCCCAATTCA 
    TAATGGGTGC ATTGAAATTA TTTTTGTTAT ATGCATAATT TAAAGAATAA 
    GGAAATTGAT ATTAATTACT TCCTTTTCAA ACCAGAGCAT GATTAATAAA 
    TCACGTTTAT TTGTCAATGC GCTGGTTCAT ATCTGATTTT TTACCACCGC 
    CAAATTTGGA GTCCATTAAC GTTTTTTTTT TTTATTTCTA NAAAANGNNA 
    ATTNGNTAAA ACCCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26485683 [Map]; Strand: c
      • AT5G66300.1 - [+] show detail - NAC domain containing protein 105
        Distance: -4349; Region: intergenic
      • AT5G66310.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: 2; Region: intergenic
    Flanking Genome Sequence: 54-4530-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGNCC GTTACCGACC GTTTAAGAAG 
    CCACTACCTT CAAATTCACT AATTGTGAGA GACGATTTAA ATCAACAGGA 
    TCAGAGAGAA CAAAATATTT GGTAAGATTT GTTTCGTGGT CTTTGTATAC 
    AGTAGTTACA AAAAGGAGAG GGACAAAACG CNTGCGTTTC CAAAGACTAG 
    ATTTCTTGGG ACGTGGTGGT CTGAAAGCAT AGTTGACGCC AAACATCTCT 
    GTGGAAGTCA ACTTCATGTC CACGAACCCA TTGAGCTTAC CAACGAGGGA 
    GGCGCTCTCT CGGACATGAC CCATGTCTTT GTAATCCGAC CAGAGACGAC 
    GCGCCAGCTG GACCCGTCTG TGATTCGTGT TGAGCCCAAT GCCCCATCTC 
    AAGAACAAGT TCTCTCTCTC TTCTTTCGAC AGTTTCCTCT GCATCAGCTT 
    GCTCAGCTTA TACCTCTCCC TCGTCAATGC CCTCGTGCTG CTTGTTTTTA 
    TATATATTAC ATTACTTTAG TGTCTTACTA AACCAAAAAT TAACGAGGTA 
    ACAAAAAAAC ATACAATGTG ACTTTTACCA GGAGATTAGG GTCATATTGT 
    TGCCATCGTT GCTATTTTGG GCAAAAGATT CTCTGATGTA CTTAAGTCTA 
    CGGAGCTCTA CCTCCAAGTA CAAGCAATCT TTCTGATCGC CTCTGAACAG 
    AAGGAAGAAG TAGCTTCTGT GTGCCATTGA GACTTTACAC ACGTGCCATA 
    GCTCTATTAT CT

AT5G66300.1

Model type
Protein coding
Short Description
NAC domain containing protein 105
Curator Summary
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description
NAC domain containing protein 105 (NAC105); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76 (TAIR:AT4G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66310.1

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G51150.2); Has 12086 Blast hits to 11258 proteins in 438 species: Archae - 14; Bacteria - 210; Metazoa - 5156; Fungi - 1590; Plants - 1989; Viruses - 17; Other Eukaryotes - 3110 (source: NCBI BLink).
Link
InterPro Scan - TAIR