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54-4533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2632556 [Map]; Strand: w
      • AT3G08660.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4533-1 - 5-prime edge 
    CCTGAGTCTA CACAAGTTTA CGGCTATTAT AGAGACACGT ACCCGAACAC 
    TCACTGTATC GTTGACGATG GGATCTACAG AGCCATTGAT ATGTATCTCA 
    AGGTAAACAA AAACACAATT GAACAAAGTC TTTTTATGTT TTGAAAACAT 
    CTGAAACTGA TAATCAAATA TGGAAATTAG GCTCATCCAT TATTGACAGA 
    CGAAGAACGC AAGAAGCTAT GCAACTTCAT TGACTGCAAG AAACTTTCAC 
    AAGAAGCAAG CAACCACGTG GCACAAAACG ATCGGCTGCC TGTACAAATG 
    GTGGTTAGAG TGCTTTACAC AGAACAGTTG CGACTGAAGA AAGCTCTGTC 
    GGGAGATTCA GAAGAAGGGT CGTGGGTTTT GCCTTCTGGA GTACAAAGCC 
    GAGCGGTTTC GCCAAGAGAC ACGTATGCAG CGTTGAGGAG AGAAAACAGA 
    GAGCTGAAGC TGGAAATATC AAGGATGAGA GTGAGAGTGA GCGAGTTAGA 
    GAAAGAACAT AATTTGATGA AACATGAGAT GATGGAGAAA TCCGGTAATA 
    ATGGTGGAAC GTTCTTGACG TCACTGTCCA AAGGAATTGG AAGGATCGCG 
    ACATTCNGTG GAGAAAACCG GCAAAAGGTG AACCGGAAAT CANGGNCGGN 
    GTNNGNNAGA AAATNANTNN ANCNGGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2632440 [Map]; Strand: w
      • AT3G08660.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4533-1 - 3-prime edge 
    GACTCAGGTA TGGATCCGGT GCGATCTCAA CCAAGTAAGC ATCCATGATC 
    CGTCCCACTT TCAGCAACGA ACTGTGTTGT CCAGTGGAAT CCGAATCGTA 
    ACCACATTCT TCATCTTCCT CTTCAATCCT CTCAAGAAAG AATGTGAGTA 
    TCCTGTGGAC GGTATCCACA TCGTACATTG AATCTTCGTT TTGGACAGAA 
    GGTATAAGCA GATCATCGAG AGACGCGGTC TCTAACTGAT GCCCGATTCT 
    ACGTTCAAGC TCGA

AT3G08660.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Computational Description
Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 956 Blast hits to 919 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 886; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR