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54-4534-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23368107 [Map]; Strand: c
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -515; Region: promoter
    Flanking Genome Sequence: 54-4534-1 - 5-prime edge 
    CTGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATATA CATGCATCTA CCTTAGCTAA CCAATCCACT 
    CTCTCGTTTT GCTTTTAATA ATAACTAGTA GTAGTATTGT TTCTTGGCGA 
    CATATTCCCA AGAATTGAGA TTTCGTTTTT TGTTTATTGG GTTTGTTCCA 
    ATTGCAAAAA TCCGGGATTT GTATTGCGAT ATATGGAATG GAATAAACCA 
    AAAGTGTCTC TTTTTTATAT ATATAANAGG GATTGGATTG TACCTCTTAT 
    GAATGAGNAA TGTGAGCNCA TCNTATGGAA TGATTCNTAG TNTACANATG 
    CATATCCGCT GGTTAGNCAG CNCCTGCANN AGNGNNGGGT TGNNTAGNNT 
    AACAAAANAN ATAGTTTGAT TGNNGAACAC NNCTAAAAAN NAATANAAGG 
    GGGGGNAAAA AAANGANCGC GNTGGGGGGG NGGAAAATTN GGNAACAANN 
    NNANGGGAAA AAACANGTGG GGGGGGNGNT NNNNNCACGN NNCNTNTNTT 
    TTNTNNGGGA GGGGNGGTGA GGGNCCCCCC CCNNNCGNGN AAGAGANNAN 
    AAAAAAANAG GGGGGGGGGG AAGGGGNAAN NNCTTTTTTT TTTTTNAGGG 
    NNNCNCGGGA NAAANAAGGT GGGGGGGGGG GGGNNNNGNN NNNNNGNNAA 
    ANAAAANNGG GGGGGGGGGG NCCNNCCNCC CCNAAAAANN AAAANGGCGN 
    NNNNAANNNN AATNNTNTTT TTTTTNNATN NNNGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23368117 [Map]; Strand: c
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -525; Region: promoter
    Flanking Genome Sequence: 54-4534-1 - 3-prime edge 
    ATTTTGAAAA CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT 
    CCTTTAATGG GTGAAGTTTG AGGTTTCGGG AGACCACCAC CAACAACAAT 
    TGTCACTTTA TGTTTTTGGA TTCGTATTTA TATTTTTATC ATAGGAAAAA 
    GGGAATTAAC ACTGTTTACC AATATTTATT TGCAAGGCAC NTTTTTAGTA 
    AAATGTGAGT TTTATAAAAT TTGAGTTCTG TTGTGTGGAA AGAGGAGGAA 
    ATGCTTTTGA CCCAAAATCT AGACTAATGC GAGACTCTGC CTCGTCCTCT 
    TGGACCATCT ATTACTTTAT CAAACTTTTA ATTTCAAACG TATAAGACCC 
    CCAACTTTAT TATTGCAACG ATACAATGTG ACAATGTGAC ATTGCATATA 
    TATTATATCC ATCCACGTGA TGTGAATGCT AGCTTATATA TAGCATATGA 
    GAGTAACATA TGGTACAATT TATACGAACA TAAGATGGGT TTGAATTACT 
    GTGCCTTAGG GTTTGGGCAG AGTCAACTTT CAAACTGAAA ATAACCCTAT 
    TTGTTTAAAC ACAAGACAGA AAAATATATG ATCTTGTGGG GTTAACTTAT 
    GGGGGGCAAT GCTCTAAGAT TTTGCTTTAT CTAACTTTTC AAGATTATAA 
    AATCGAGTGT TCACTTTTAA GACATTGTTT GATGAATTTA TGCGATATAA 
    TTTTGTAAGG TAAAGTTAAA ATGACACATG CTGCATGTGG GAGACCG

AT3G63240.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR