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54-4569-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8079567 [Map]; Strand: c
      • AT5G23940.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4569-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT ACAACCAGAA GTTTCTACTC TACAAGTTCC 
    ANAACCTTCT AGATCTCGAG GAACCCACAT TCCAAAACGA GGTCGTGGAG 
    AATCTCAAAG ATGGTTTGGG TTTGGTTCTT GAAGACTTCT ATCAACTCGC 
    CGGTAAGCTG GCCAAGGACG ATGAAGGAGT CTTCCGTGTT GAGTACGACG 
    CTGAAGACTC AGAGATCAAC GGCGTAGGAG TTCTCCGTCG CTCATGCTGC 
    TGACGTAACC GTCGATGATC TAACGGCTGA GGACGGGACG GCTAAGTTCA 
    AGGAGTTGGT TCCTTACAAT GGGATCTTGA ACTTGGAAGG ACTTAGCAGA 
    CCACTCCTTG CTGTCCAGGT ATGATGACTT CTTTTAATGT TTATATATTN 
    TATACATATT ACACTAATCC CATGTCAGNN TCTTTGTCGT CCAACTTGTT 
    TATTTTCACG TATAATAATA TAGAATTAGA TNTTCAATCG GCGTGACGAA 
    AGAAAATATN TACAACTAGA TNACCACTAC TGATTTTACG TATCTGANTT 
    ATCACACANA TATCTGATTA TGTAATCATT NCTATGTGGT TATGTTTACT 
    GAATCTTGAT GCATGTTATG TAATAAAATA TATTNAGAAC TACCTACCCG 
    TCAATAAATA TNACCATTNN AAGAGAAACA TCACGGTAAC ATCCAAAACT 
    CTATTAGTAT TANCTATNAA NAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8079576 [Map]; Strand: c
      • AT5G23940.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4569-1 - 3-prime edge 
    TTTAAAACGG ACAGAGGTAT TTTANCGACC GTTACCGACC GTTTTCATAG 
    AAAGCAAGGT AAGGAAGATC AAATGTGGTG AGGTGGAATT GTTTCTTCCC 
    TAGTACTGGT TTTGTTGGTT TCACATGTGT TTTGCTCATA ATCTTTATCT 
    TCATGGTGAA AGAGATTTTA ACCTGGCCTT GGATCAATGT GGTATTGTGA 
    TGATCACAAG AAGATATTAA ATTAGCTATT GTTTTTCTTT TTGTGTGAGA 
    CTAGAGTGTA GTGTGGAGAG TGGTAAAGAA AGAACTAAAG GCTGTGTTTT 
    ATAGAGATGT GCAGTGTGTA GTTGGGTTAG GCATTTAAGG TTTCATGGAA 
    GTAGTTGTGA TTCAATTAAT GACTCAATTA CACTTTTCTT CCGTAAATTT 
    ATTTGCATGA ATTGTTAAGT TAAATTAAGT TGTAGTTTAA GGATAGAGGT 
    TGAGAATTGA GATACAAAAA TAAGTATTGT AATGATGCTA CAAGTGTAGG 
    ACACTATANA TGCCGATAAA GATGGTAACG AAGCTCAAAC CAAGCCAAAA 
    ATTGTAGTAT TTTGGATCGT ACCTGTATTT AAAACGAATC CTATATATAC 
    ACTACTTTTA ATTACATGTG CATGACACCC NTATANTTTC CTATATTTTC 
    TGAAGACATA GCNTATGCTT TCCATNTTAA TANGTTTATA ATATTTGGNT 
    TAGATNCCTT AATGGNTNGN CAANAGGTTG GACTATNCCC NGNGTGGNNN 
    TATNAACCNT NCNCANTNTT TAATAATTTT TTTACCNCAG TTTTATTAAA 
    CTNNTAAAAN NGTCCT

AT5G23940.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Curator Summary
Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.
Computational Description
PERMEABLE LEAVES3 (PEL3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: epidermis morphogenesis, localization, trichome morphogenesis, cutin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR