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54-4593-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5594328 [Map]; Strand: w
      • AT4G08765.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-4593-1 - 3-prime edge
    NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNAAAAAAAA ANTNAAAANN 
    NNNTTTNCAG GCAACCTNGG TTATTTGGGC NCGCTGCCTT CNGGANCGAT
    CGGTTGATAC TCTGCNNTAA CTCGACTNGA TCTCGGANCG AGCAGGCTGG
    CANCTGGATC AATCGAGCTC NGTTTCTGGG AGTAAAAGAA ACTCACCCTG
    NCGACNANCG ATAGGCGAAT TTGGACAGAT ATAATCNNCT TCGNTTGCTA
    GAGCACTCTC NNANTAAGGA AAACNTTCCT CCTANAAAGC AACANNNNGG
    GAAACAAAAA TNCTTTCAGN NGTGGAAATC CATNANNAAC CATCCNTTCN
    CNTCGAAATN GATNATNCAA GAAAANGACA TCGANCACTG NGANCTTCAA
    ANNNAGTCAT NCNAACGTCT TACTAGCTNT GCATAGCAAA NGCACCCNNA
    TATCCTTATA TCANCATAAN AAGGAGGANT CTGAAATAAT ACTTCGTATG
    GTGNNATCCC CNCAAGNNAG GATNGAANGC ACCCGGTGGG GCNNNANGAG
    NNGCNGCGTG ATTGCTTTCT CCCCANAAAC NANCAGGAAG CTTGGNNNGA
    AACAAANAAT GCTCGACCAC NCCGNCNGAC ACGGNNANAN GAAGTCTNGG
    ACCNGNGNCG AGTTCACCAA ATATNGTGNN ANCACCCANN CNCNAACCCC
    AANNACGAAA NNANTANNTG AACCAGNNNC AGGNAGNAAT CATANAAAAC
    AGAAGANGGG NNNGNNGAGG GNGCGANCTN CGGCCNNCAN ANACCAGNNN
    TNGGCGCGNG NGCNNCNGAC NNGNCNACNG GGNNNGNTNC GNAGGAACNN
    NNNAAGGANG GAACACNCGT AANACAAGNA AANAGANANG

AT4G08765.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.2e-158 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR