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54-4594-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16579449 [Map]; Strand: w
      • AT4G34750.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 997; Region: intergenic
      • AT4G34760.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2734; Region: intergenic
    Flanking Genome Sequence: 54-4594-1 - 5-prime edge 
    CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC GATTAAGCTC AGTGTTGGAG GTTTTTAGAA 
    AATTTTCATG ATTTAAGAGC TATTTCCTTA TAGATAATAA CTATTTTGTT 
    TCACTAGCTA GAGAAGAGTA TCCGGATTTC CGAGTATATC GTAGAAATTA 
    ACCAATTAAT ATTCATTAAA AATTGTTGAC AGATTGATAT TGTGCTTTTA 
    CTAGACAAGA ATATCTTGGT AAATCACATT GCTTTTGCGT GAGTATTCAT 
    CAAAGCACTA ACTAAGCAAT TCAATGATTT TTAACTCATC AAGAATATCT 
    TCGGAAAGTT ACTATTTTTA ACCCATCTTT ATTAGATTTT AGTTAACTAT 
    CATACGAAGC CATTACTTTT CGAAGGTTTT CGACCATGGC CCTGCCAAGA 
    TTCGTAAAAT ATGGATCGGA TTAAAACTGA TCCTGATTTC TCTCCATAGC 
    CTAAAGATCG GTCAAGGCGA CACAAATAAC ATCGAGATTT AATATATAAT 
    CTGAAAAAAA GTCGTGCAGA CCTAACCAAC TCTAGTTGAA CCTAACAAGT 
    TTACCGTCTG AATCTTTGGA ACTCTTTTAA ACAAAAAAAT CCAACCGAAT 
    TAAAGGTCAA TAGTTACACT AGCTAGGGAG AAATGATTTA TGAGCAAGTT 
    GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16579357 [Map]; Strand: w
      • AT4G34750.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 905; Region: intergenic
      • AT4G34760.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 2826; Region: intergenic
    Flanking Genome Sequence: 54-4594-1 - 3-prime edge 
    CAGCAGCATA TATGTGTTCA TCATCAATTC ATCCTTAGAG AACATTAGGT 
    TATATAGTAA AAGTGAAAAC CCAAAGGAAA CAGTAAGTAA GAACTTGATC 
    ACGTTCGTGG TCAATTTAAA ATGAAGGAAG AGGGTCATTT CTCACAATCA 
    TTGGTCATTT CTCACAACGC TAAGCTTATC CGAGATGATC TTTGTAGATA 
    ATACTTTATT TTGTNGTCGT TGTTGTAAAT TTATACTCCT ACTAAAGTCA 
    TATGTTTGTT TTTCTTAGAA GGTGGAGAAA ATGCGNGTGG GAGATACTCC 
    CAACTGTTAA NTCACCGTAN GANTAAGGTG AGATGATCTG ATNNAAGNAN 
    GTNCCNNNTT CACCNAACAA NTGCTCGATT AGATCACTGT GNGGNGAGAG 
    GGTNGGNNNA TATCCNNNAT ANAAANNGGN TGNNCTCNGN GNAGNNNANC 
    NATNCTNTAN NAAAGAAAAA NNNNAATNTG CGCTCTTAAA NNCTNTTCCC 
    CNTGNGNGCT TTTTANTGGA AAAAACNNNG GAGGGNGNGG GACTNNNCNA 
    AATAGNNGGG NTANAATNNN NNCCNGGGNG TTTTCNNTNG NGNGTNNNNN 
    GNGTNANNNN NGGGGTTGGN GGNGGGGGNN TNCCCCCCCC CCGGGCGGNA 
    GNNCCNGGGC GNNNACAANT TNNNGATGGN TTTNNNNTAA NANNNNCNNN 
    GNGGGGGNNA TANTNNGTTG AAANATAATC CGGNNNNGNN NNCNANCCTC 
    NNCGNNGANA AAAAANTGGG CNNGNNNTCN NNTTNTTT

AT4G34750.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1347 Blast hits to 1333 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1346; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34760.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR