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Mutant Lines
54-4602-1

54-4602-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 8630678 [Map]; Strand: w
  - AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
    Distance: -762; Region: promoter
Flanking Genome Sequence: 54-4602-1 - 5-prime edge
```
GTATAGAATC ATATGATAAA GTTGACTAAT AAAAAGCAAC AAATAATCCG 
TTACCAAATA AATACCTGGC TCGAACTCCA AAATACACCT GAGGACGATA 
AATTCCCCAA TACAAGCTAG
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 8630562 [Map]; Strand: w
- AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -878; Region: promoter

TTCTATACAC AACTTTCACC AAACTGTATT ATGTGTATGT GAATCAGTTA 
TTCTGTTAAA AGTCAAAGAC CACTAGACGA CTACTGTTAC AGAGGATTTG 
AAGGAATTGA TTTGTTTTTC TGTGTTGTCA TATATAAGCA CTAAAAGAGC 
TAGTGTTCGT TTCTTGTACA AGCTGCTAAG TTTTTGTAGA TGACTATGCA 
GAACTCCCAA GTCCCTTGTT GCTGGCNTTG ATGTGGCTCG TTATGAAAGA 
TGGAAAGCCT GTTATGAGAC ATTTCTGTGA AAACTCTAAC GATCTTAAGT 
CATTTGGTTG GAAAGAACAC AATGGAAGAG ATTTTGGGCG ACAAGAGCTG 
TTTGAACAAG ATATGGTTTT GGAGACAAGT TTTGTCAAGT CTGAGGAAGG 
CAGCCTTGGT TATGGAGGAG ATTGGTCTAT TAGAATCAAT GTTCAAAATA 
TGTTGAATGA TGATGAAGTA AAGAGAAGTA CACATCTCTT CTTCTATCTA 
GCTGATGAAG GTTGCAATGG TGTGAATTTA GGCAAAGATG TGTTAAGGCT 
TAAAGAGAGT TCTGTCTTAG CTTCAGGTTC ACGTCAAGAT GTAGGAAACT 
GGCAGATGCA CTTAAAATCA CAGGTAACTT TTGATTTGAA ACTGTTTTTA 
TTAGTTACTT ACTGTTTTTG CAAGAAAATA ACCATTGTAT CTGCTCTTCG 
TTTGCAGAAT CATCTTGAAC ACAT

AT1G24320.1

Model type: Protein coding
Short Description: Six-hairpin glycosidases superfamily protein
Computational Description: Six-hairpin glycosidases superfamily protein; FUNCTIONS IN: mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity; INVOLVED IN: oligosaccharide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: glucosidase 1 (TAIR:AT1G67490.1); Has 471 Blast hits to 459 proteins in 200 species: Archae - 2; Bacteria - 99; Metazoa - 113; Fungi - 132; Plants - 45; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24330.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink).
Link: InterPro Scan - TAIR