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54-4652-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463652 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4652-1 - 5-prime edge 
    CTCTACGCTC ATCTTCCTAA TTCCCTCACA CAACCCATCC ACAATCCCTC 
    CCTCTTCTTC CTCCTCTTCC TCGTCGTAGT ATTCCTCATC ATATTCCTCA 
    CCGTAAGAAT AGGCTTCTTC CTCTTCATCA TCATACTCTT CGTCTTTGGC 
    ACTTGCATTG GCCTGCATCG ACCACACCGA CGAGTTATCA TCCTCTGGGT 
    TTTGAGTCAC CACAGATGAG CAGTCTGAGC TCTCCCATAA TTCTGATTTA 
    TCACTAAAGT CCAGAAGCAA TGACCGAGTA ATGCTCGGGC TCTTCTCTAA 
    CTCCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463768 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4652-1 - 3-prime edge 
    GCGTANAGAC TGACTTTGCN NGGANACACA CTANATTTGT GTATGACAGT 
    GAAGATGAAG AGATTGTGGA GGCCAANGAT CAATCTCCAN GAGTGTTGCG 
    NCTGAAAGGC TTTCCTACAC CGACAGGAAA ACATGTCAGA TTNGCCGGTG 
    ATGAATGAGT TCAGTTNGAA TCTTTCTTCT TGGAGTTGTG ACAAAAAGCC 
    TCATATGTCT CGACTTTNTT TTTTTTTTNT NTAANAGGGN TGTNGAAAGC 
    CAANAAGCAN NTCNTTNNNT NACNCNTGGT GTCTNTTTNN GAAGATNNCT 
    GGGGAAAACG GGCATNNCTC TGTTTCCTTT TTNTTTCTTT GTTGGGNGGG 
    TNAAAAANGN GTCTCTNTNT NGTNNCTCTG NTNCNCTTTC TNCNAANAAA 
    NCCGCCAGAT GCNTGTGTGT AANATATAGA GNATGTNGTT TTTGACCATN 
    TGGGNTCGTG NAGAAGTNAG GATCCCNTCT NTNNACCCCG NTNCGCNCTA 
    NAAANNNNAC TNAANANTNT TTGNGNTCTN ATGGGTNTNN NNAAGNCNGC 
    CTCCGGGNCN TGNNATGTTT NGNTTNNNNA NTNGNGNANN TCNNTNNGAG 
    ANAANANANT GTTAGGCNGN TGNGGGNATN TNGTANAAAN NNNNTCGAAC 
    CTCNAAANAA ANGNAANNAG NTCANNAGGN ANGGANTGNT ACACCNNNNA 
    CCTNAGGNNN GGACTNNNNN NNTANAAATT NANATNANNN AANATNNNNN 
    GATAGATNCA AAN

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR