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54-4663-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 16470707 [Map]; Strand: c
      • AT1G43675.1 - [+] show detail - transposable element gene
        Distance: -165; Region: promoter
    Flanking Genome Sequence: 54-4663-1 - 5-prime edge
    GNCGTGNGAA NNAGGNNGAN TNAANACCAT CCCNGGTGCT CGTGNTGCTC 
    CNATGGAGAA AAGCGCTTTA CTGTATTCCC TNAATANTGA CCTCCTTTAT
    NNAGGCTTCA TTCNTCGTCT GCTTTTCTTN TGATAAATCA ATAGAAGCGT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 16470778 [Map]; Strand: c
      • AT1G43675.1 - [+] show detail - transposable element gene
        Distance: -94; Region: promoter
    Flanking Genome Sequence: 54-4663-1 - 3-prime edge
    TATNNNNGNA TCCTTTGGGA CTCGGGGGTN NATTTGCCCG TTAANAACCG 
    TTTTCTCCCT TTCTCTGGGC GAGGCGATTN TCTCGGGGTC NTNAACGTTT
    TTGCTACTTT GTTTGCGTCC TGGGGTGGTC TCATGCTGTT CTCGTGTTCT
    CCTTGNCTGT CGNTCTTACT CTCGCGTGGT TTCCTTGTTN GAAGGTNNGA
    NTCTGAGCTG GGAATGGGCA NTTGCCAGGA TGAAANNTTT ACATGTNCNG
    AANGTGCNTT TTGGGGCCCC TCCNGCTGGA GATNTTCNNT GTCCTTCGTN
    GGCCTGANGA CTGTCCGTCT NTTNTTNGTC CTATTTNCCC CCTGTTGTCT
    NTGGCTGATG GGCTGGAAGA TTGGTTNNTN TTTTTTGCGC CTGGTGGGTG
    TCATTANGGG GCCTATAGNC NNGCCTCGAT GTNTTNCTNC TGCTTTGCAA
    NTCGANCTCT TATGTTGGCC TCNAAGTNAC CCTANGNGGC TNCTCGCCTG
    CCTNCCCGGG CNANCTNTCC NAAGCGTGNC CTGCTNGNNG NTTTTCCTCT
    NTCCTNCNTG NNTNGCCGGG GNNTNTNCNT ACNNTNNGCT NGNCNTGTCN
    GGGNGNNNGN NGTNTNNCNA NTNCCNGGTN NCNNGGTTCC TTGCTTGTAN
    GTNNGNCGTN NNNNNNNNGN CNNGNCNNGN CNNNGTGNNG NNNNNGNATG
    CNGNCGCGGG NGNCTNNGNG TNTGGTGTNT GNNCNNCGNG GNTNAGTGNG
    GTTATNGCGT CTTACTCNGN NCNNCCCGCC NGCNNGGGCG GNCNNCGCGN
    TGTNANNTCA NGNAGAAAAG AAGCAAAANA AACAAAAAAN AAAAAAAA

AT1G43675.1

Model type
Transposable element gene
Short Description
transposable element gene
Curator Summary
similarity to non-LTR retroelement protein
Computational Description
expressed protein
Link
InterPro Scan - TAIR