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54-4702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19976426 [Map]; Strand: c
      • AT3G53950.1 - [+] show detail - glyoxal oxidase-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4702-1 - 5-prime edge 
    TTTNNACCCG GCGNTAACAN CGGGTTTTNG GGGACCTNTT TCACGACGGC 
    GTTTNTCCGG TGATCGTTTN TAACGGCGCG ACTGTTGGCG AAGATGAAGA 
    GATTGCCACC GTCGTCGTCG GGGAGGAGAT GAACGTACGG ATAGAGATTA 
    TCCATTTGTT TGTCTTCCAC GTCNGTNAAA AACGAAAACG GAACGGAATT 
    TTNNTTTNTN TNNCNCGNCC CCNGNNTTTT TTTTTTTGGG GTGGNNGNNN 
    NTGGNTGNNT NTTCTGTNNT TGGGGTTTCN TTTTNNNCNC NNGNCCNNNN 
    NCGGTNNTTG TTNGTNNTNG CGNTNNNGTT GGNGCNGTTG CCNNGNCGGG 
    GNNNGNGGTN NGGNTCCGTN TTGTTNTNCT TTTGTNTGNN TGNNNGNGGN 
    NGGGGGNGNT GTTNTTTTTN TCTNNCCCGC GNCTNTCCCN CNCCCNTCCT 
    CCCTTNNTCC GCNGTNTGNT NNNNNCTANT NTTNNNTNNT GGCNCCTGNC 
    GGTGCNNTNT NGCCTNCCGN CCCCCNTTTC CNTNGTCCCT NTCNNGCNCC 
    NCTCNTCTCG TTGNGNTNNG GNCTCCCGCG CCCCCTCCGT GTTNCNGNCG 
    NNNTTTNTGA TTTCCCNCCT TTTCTTTTTT TTNTTTNTTC NCNCTNTTCC 
    NCNGNCGTGT CGTNNGNNCN GGNTNGCTNG GGTNNCGNGC NCGGNTNNNG 
    TNNCNNNNAN GTTGTTCGNC CNNTNNNNCN TCNNNGNNTN GNNCGTGNCA 
    CNCGCCNCCC ANCGCGGNNC NNCGCNGNNT NCNGNCNGTG ATANGCNATA 
    GNNCGGNGNN GNNANCGCCN CCTNCTNTGN NGCACNNTNC GNGGACNTNN 
    NGNNNTNGGC NCNNGTGNGA GCNACANNNC NGTNTGCNNG AACNCNANAN 
    NANTAAAAAG AAAATAAAAA AAN

AT3G53950.1

Model type
Protein coding
Short Description
glyoxal oxidase-related protein
Computational Description
glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 849 Blast hits to 839 proteins in 169 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 246; Plants - 262; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR