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54-4749-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 53559 [Map]; Strand: c
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -110; Region: promoter
    Flanking Genome Sequence: 54-4749-1 - 5-prime edge 
    GGTATTCTAA ATTCTCTCAT TATAGAAGTG TTCAATGAGG CCCAAGTAAT 
    TGGTCTTAAT ATGGGCCCAA GTAATTGGTC TTAATATGAG CCCAAGTTAA 
    ACCCAACTTA AACGATTGTT GGAGGCNGGC AAAATCAACA AATCCCAAAC 
    TCTGGAGAAT CAAATTCCTA ATTAGCTAAC AATGGCGAGG GGAGAATCGG 
    AGGGAGAGAG CTCAGGAAGT GAACGAGAGA GTTCGAGCTC GAGTTCCGGC 
    AACGAATCGG AGCCGATAAA GGGGAAAATC TCGGAATATG AGAAGCAGAG 
    GTTGTCAAGG ATCGCTGAGA ACAAAGCGAG ATTGGATGCA CTCGGCATCT 
    CTAAAGCCGC CAAGGCTCTT CTGTCACCAT CTCTAGTTTC AAAAAAACGT 
    AGAGTTAAGC GGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 53675 [Map]; Strand: c
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -226; Region: promoter
    Flanking Genome Sequence: 54-4749-1 - 3-prime edge 
    AGAATACCCA ATAGCCGATT GATTATGTTG GGCTTTACCT TGAGCCCATA 
    TTGATATTAC AGCCCAAATA CTTGGACTCT CATTGAACAC TTTGCTGATA 
    AATCATTGAA AACCCAATAG CTCATGATGA TCATTATTTT TATTTTTTTT 
    AATATTTGAA AGTTTAAGTC GAGAGGCCCT ATATTTCTTA GAATT

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR