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Mutant Lines
54-4770-1

54-4770-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 1174125 [Map]; Strand: w
  - AT2G03840.1 - [+] show detail - tetraspanin13
    Distance: 10; Region: intergenic
  - AT2G03850.1 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
    Distance: -1456; Region: intergenic
Flanking Genome Sequence: 54-4770-1 - 5-prime edge
```
TTTGTATCGG CATGACCGGT TGGTTTGCCT GGTTAAGGAT C
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 1174009 [Map]; Strand: w
- AT2G03840.1 - [+] show detail - tetraspanin13
  Distance: 0; Region: exon2 (CDS)

GATACAAAGA CTAAAGATGA TATGAATAAT GTTAACTGTT ATGGAAAATG 
AAGTATTATG TACATCAGCA ATAATCACAG CTTTACATGA ATCACAATCG 
AAGCATAATG TATCTGCAGA ATTGTTCCAT CTCTTGCAAT CAACNTTCTA 
AATTGTTATA ATATCTTGAA ACTGTCCAAT TATTTGGTTT CTCGTAATTC 
AATCCACATG AAAGTGGTGG TTTGCAACAA CCCGACTGTC ATAAAAAAAG 
AAACAAAATT AGAATGAAAT AAAAAAAAAN CNTTAANCCG GAATCAAAAC 
TANATTCGGT TNGATTTAGT TAANGNGTAN CTTAGGTTAT NTTACCTGTN 
TAGCTNAAAA NCTGGCNTNT TATGGTTTAA CCTGTTNCAA ACATTGTCCT 
TAACAANANA TNTCCTTGTN CNANNCCATT CATCGTNTTT AATGACCAAT 
CTACTAACCC ATCCTGAGTA ATCCTCGTNC CTAAACTCAT NAATCTTGGT 
CCCAGGAAAC AATNTAGGAT TGGNCTCCTT ATGTANAAAN ATGACAAAAA 
TTGCTTTAAA CNCGACAACG AACATCCNCA AGAANAANAT AAAGAAGTGG 
ATTCNAAAGA NACAATCGGA TTTGAAGTAA GCTGCGTNNA ATCCAGTGAG 
GGACATAGCA AGCAATGANA AGCT

AT2G03840.1

Model type: Protein coding
Short Description: tetraspanin13
Curator Summary: Member of TETRASPANIN family
Computational Description: tetraspanin13 (TET13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: integral to membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 414 Blast hits to 412 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 414; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G03850.1

Model type: Protein coding
Short Description: Late embryogenesis abundant protein (LEA) family protein
Computational Description: Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G03740.1); Has 577 Blast hits to 318 proteins in 93 species: Archae - 1; Bacteria - 101; Metazoa - 17; Fungi - 21; Plants - 408; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR