Home
Mutant Lines
54-4782-1

54-4782-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 20502741 [Map]; Strand: c
- AT3G55290.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT3G55290.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: intron1 (CDS)

ATCATATGGT AAAGAAGATA ACAGAAATCA TATTTAAAGG TTAAAAGCAT 
GGTAATTTGG AGAGTGGTCT TATATAAATG GTTATATGAA TAGTTTTGAA 
GATAAAAAGA AAGATGGGAA ATGAGAGAAA ATGTTATCTC ACAGTTTGAT 
GATTGCTCAT ATTGTTTTTT CTGTGTGGTG TGTTCGATGG CCAATGGGGA 
AGGAGAAGCC AATAACATAT AACATATATA AATACAAGTG TCAAAAAGAT 
ATAATCTGAT CCATCTGCCA AAGACCGCGG TTCTAGAGAT ACCAAGTAGA 
ACACGTCCCA TAACAAAGGA CGGTTTATGC CCAAATCTGT AGGGTCTAGG 
TCCTAATTAA CACTTTAGTC TACTACATGT AAAGCCTACT TCATTACCAG 
ATCGACAATT TAACGTGCCA ATGTCTCGAA ACTGATTCGT GGGAAACAAT 
TTAGGTTTGA TGATTTTATT TATTGTTATC TTTATTAATA TATAGATACT 
CCATCTGTTC TTTTTTATTT GATTTTCTAA GAAAAATATT TGTTTCAAGA 
AGATTGATTT TTTAGATTTT TTTATGCAAT ATTTATTANT TATTACTGAT 
GAATTATAAA CTTTAATAAA AATAATTGAA TATTATTGGT TTAAAGTTAT 
AGAAAAATTG TNAACCCCAA AAAAAAGTAN TACTTTAAAA TCACCTTAAN 
NTGT

3 prime edge [+] show sequence

Chromosome: 3; Position: 20502857 [Map]; Strand: c
- AT3G55290.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT3G55290.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: intron1 (CDS)

CATATGATTC CATATGGAAA AATTGTCAAT CATGTGTTTT TGTCTTTGTA 
ATCTGAAATT ACTTGATTTT TGTATTTTGT TTTTTTTTTG GGGGAAAAAA 
NCAGGNGTTG AACCTNTNGG ANCCATGGNG NNAACTTAAA NACAAAGNGG 
TTCTTGNNAC AGGANCTTCC TNTGGTNTTG NAANAAANAT CTGNCTTGAT 
CTTGCCAAAN CTGGTTGCCA GGTTNTTGCA NCANCTCGTC GNGTTNATCN 
ACTNAACTNT NTNTGCTNTN AAATCAACAN CTTCAGTTCA NCTGGAATCC 
AANCCGCANC TNTTGANTTA AACNTTTCNT CAAACCCANC CNCCNTTCAA 
AAANCGGNCA GGGAANCTN

AT3G55290.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 128769 Blast hits to 128555 proteins in 3647 species: Archae - 1021; Bacteria - 82974; Metazoa - 6760; Fungi - 6996; Plants - 3211; Viruses - 5; Other Eukaryotes - 27802 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G55290.2

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR