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54-4796-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20849005 [Map]; Strand: w
      • AT1G55760.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4796-1 - 5-prime edge 
    CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATGAG AGAGGGAGAG AGGGAGAGAG GGAGAGAGGG 
    TAAAGTGTTT GGTGTTATGT TCCTTGGCTT ATTTCTCTAA CTGGACAGTC 
    GTATGGGGCG TGTGTCTCAT TTATTGGACA CTCTAGACCT GTCTCCAAAC 
    TAATTTCAGA CTTTTAGGTT TATAGATACT TCAAAATTTC CTGGGTTAGA 
    TAAGGGTTTT GAATTACATA ATTGACCCCA TGTATTATTT TTTTCGTTAT 
    CTGTCTTTTT ACTACACTAG AGATTGATCT GATGCACAAC CATTTTTGTT 
    GATATTTAGT GCATAATAAT TTGATAGTGT TACGTGTTTA CTAGGGGTTA 
    TATTAGAAAA GATCTTGGCT GATTACAAAT CTAAGTATAG AGTTTCTTCA 
    ATATGTTTTT ACTTTAATTC AATGGATTGT GAAGTTAGCA TAGGAGTGTG 
    ATGGGTTTTC CAAAANAAAA NNAAAAAAAA AAAANCNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20848988 [Map]; Strand: w
      • AT1G55760.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4796-1 - 3-prime edge 
    CTTTAAANCG NNAGAGGTAT TTTATCGACC GTTCCGACCG TTTTCATCCC 
    TCTCTCCCTC AACCAAAAGC AAACAAACCC TTCAAATGAC GTAAAAGCAA 
    AGCACTGACT TTGCTTCCCC GTTATTACCA ATCCAAGAAA AAAAGCTAAT 
    GATTCCTATC CTCCATTAAA ATATTCCTCT CCCTAACCCA AATCTCAAAC 
    CTTCTCTGTT AGCTTGCACT CGCATATGCA TATAGGTATG TATGTGGGAG 
    TGTATGCACT AATCTTCATG TAAAATTGAC TTCAATCCAA ATCCCCTTTC 
    TCTACCTCCC TAACCTAGAT CACTCTCATA AATTCTAAAA CCATTCGATC 
    TATAAGATCA TAAGGGTAAA GGAAATAAGG AGAAGAAAAG GGTAAAAAAA 
    AATTGGTAAC TTTTATATGG TAAGAAGAGA AGAAAAGAGC AAACCTGGGA 
    AAATCAGGGG AGAATTTGCT GGAGGGTTTA CTGGATTGTA TCCATGACAT 
    CACTGCGGCT TTGGCTTTTG CTAGGATGAC TGATTCTGCT TACAGAGTAG 
    ACACCATTTC TAGACTCGCC CAATGGCGAA TCCACAATCT TTCTTCCTCC 
    ACTTACCGCA AGTCCGATCC TTTCAAGATG GGTCTTTGGA ATTGGTATGT 
    GTCTTCACTC TCCTGTGTTT TTCACCTGAT CAATTATTAT CCGACATAAA 
    TGANAATAGT GGCCGCCCTT TTTGTANTTG ATGTGTTTGG TAAAGATAAT 
    CAGATAGATT TTGGNNATTT TGGGTT

AT1G55760.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2); Has 5280 Blast hits to 5249 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 3933; Fungi - 29; Plants - 1085; Viruses - 19; Other Eukaryotes - 214 (source: NCBI BLink).
Link
InterPro Scan - TAIR