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54-4822-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289513 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -535; Region: promoter
    Flanking Genome Sequence: 54-4822-1 - 5-prime edge 
    ATCGATATGC ATCTATATGT GTTGACAATC ATGCGTTCGT GAACTCGTTC 
    TCCGAATTAA CAATGGTGAT CGCAAACAAA CTCTGATGAT CAAATCAAAT 
    AAATTGCTTC CACACTCGCA ATGTTGAAAC AGAGAATCTA AAAGCTCAAA 
    ACAGAGTCGG TTAGATCCTA ACAAACTCTT TAAACCATCT CCAATTCGCA 
    ACCAAAGCTA AACCATCGCT TCCACAAAAC TAATTGGTCG ATAACCAGCC 
    TAAACCCGGT TTGATTTAAG CTGAACCAGA TCCGTGTGAT CAATATATAA 
    AAAAGCCCAT GGGCCTTGAA CAAAACAACG TCACATCGGT GATTAACACT 
    GTTTTTAGTG CTTAATTAGT TCCCTCCCTG ATTACAAAAG TCCGTTAGTG 
    ATTACGGCAT GAAGAGACAA CGGGAAAGAG GAAGAAGCAT ATCTCTCTCT 
    CTGTCTTGTT CTATGAACGA GACCACTTGC TTTAACAGGC GGTGCTAATT 
    ATTTTCCAGA AAATAAAAAA CCCCAAAAAT CTGTACGACA AACAATTTAT 
    TAATCAACTC TTTTTTTTTC TTTCTATAAG GTTAATGGCC AGATTCTTTC 
    TTCTCTCACA CCCATTAAAA TATTTCATCA ACTTGNCGGT AAAATAATTC 
    TNGGCTTATT CTATCTTTCT TTCTCTGGCT TCTTCTTTNA ATTTTTNAAT 
    AN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289397 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -651; Region: promoter
    Flanking Genome Sequence: 54-4822-1 - 3-prime edge 
    ATATCGATAG ATAGATACAG ATTCAAAGAA GAGAGTTATA TACATGGCAT 
    GTTTGTTGAT TACTCTATCC AGAAGAAGAT TCACAGCATA GAGTCGGTCA 
    TGGCTGGAAG TCGCCGGAAA AAGTTGACGG GAGCNGGAGG GAATGCNGGT 
    GTCGGAGCNT TTGGATGTCG CATGAAGTAG TAGCCGGATA AGAGAGCGAC 
    AAGTTTAAAA GGGGTAATGT AGAGAGCCAT GGCAATAATG AAACAGAACG 
    TCACGAATAT TGCGGTGGCG CGTGGATCAC GCCAGCTCAG CAACGCTTGC 
    ACTCGCTCTC CTTGTGCGGC TATGTCTCCA GCCACCGACT GTACCTTCCC 
    GGCCACAGAT CTCAGCCGGT CGTACCTGAA AAATATGAGG GAGGAAAACT 
    ATCAACCAAT GACCAAGTCT TTCTTCGTTT TCGATTTTCT TTGATCATTC 
    TTGATTTTTG TTACCTCATT TTCACAAATG TCCGGAGCCC TTACGGTCGG 
    GAAGGTATCA AACTCTTCGT CAAGCTCATC AGAATTTACA TTGTCTGCAT 
    AAGATAGTTT GGCGTCCATA TGANGAGGAA ATCTAGGCCT TAAAACCTGT 
    ATTCCACATC CCAATNACAG NCNTATACAG AAACACAGTC GGNAAAATCA 
    TNTNCNGGGA ACCGTNNCAA NCCTNNNNGT ANANCACGTN NNNCNNANNN 
    CGNNTANAAG GGANAATAAC NTAANNAANA AAA

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00710.1

Model type
Protein coding
Short Description
BR-signaling kinase 3
Curator Summary
Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 3 (BSK3); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT1G01740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR