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54-4859-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22180733 [Map]; Strand: w
      • AT1G60140.1 - [+] show detail - trehalose phosphate synthase
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4859-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT AACCGGCGGT CACCGTCAGA GAGTTTGCTC 
    CGATCACCGG CGGTTAAAAC AATCAATTCG AAGTAGAGAG ACGAAAGAGA 
    GAGAGGAGGA ATTGGAATCA GAGAGATGGG ATATTCTGGG AGAGAGTAAA 
    AACGTATTTT AAATATTATT ACAAAATTGA GTTTGGTTCA TTCTTATTAA 
    AGTTTAGTTG GATAAGTTCC ATCGACTCAT AGACTCCTAT TTTATTTTAT 
    TTTCTTTGTC GACATTTTAT AATCTTCGGA TTGATTAGTG TTTTAGGACA 
    GATTTTTGGG ATTAGTCAAG ATAAGTGGTG ATTTAGACTC TATCAAATGA 
    ACACTTTTTT AAATTAGTTG TTATAACTAA ACTCTATCCA TTTTGTAGTT 
    CTATACTCTA TCCACTTTGT AATTATATAT AATTGCACCA CATGTTTGGA 
    ATGAATTTTT ATTGTTATCT TTCAAAAACC AATGATTAGT ATCCTTAGGT 
    AAATAACATT AAACCAATGA ATGAAATAAA AGGAGTTAAA ATAAGGACAT 
    GTCACTTTCT ATTTTAATTT TCATATTAAT CATAATTTAN AAAGAAAAAA 
    ATGAGATTTA TTAAAATGTG AAAAAACAAA TACAATTCTT TTTTTCTGTA 
    TACCAATATA TTGGNCNNTT NTTTGAATGT TAAATANGGN TNATNGCNAA 
    CTCCTATTTN AANAAAAGNA CATTGNTTTN TNTTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22180688 [Map]; Strand: w
      • AT1G60140.1 - [+] show detail - trehalose phosphate synthase
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-4859-1 - 3-prime edge 
    CCGCCGGTGA TCATTTTTTG TGAACTTCAC TTTTGGTAAG CAGCTTTGAC 
    TTTTGTTCAT AATCCTTCAC TCTTCCTTTT CAATTTTGCT TTTTCCTCTG 
    ATCTGATCTT AGTTATTAAG CTGTTGAATC GCATGATCCT TTCTTCTCTG 
    ATTGATTTCT TCTAATCCTT CATGGGTTTT ATGAGGAATC GTGTCTTAGG 
    GATTGGTTTT TTCTGGGTTG GGTTTCTAAA TTTGTTGGTC TAAGAACAGT 
    GAAATTGTTG TTTCAGTGAT CTCAGATTCT ACACTTCTAG TGATTGAACT 
    GTTATGGAAA ATTAGAAAAT TTGTGGTTCT GCTTTCATTT GAATT

AT1G60140.1

Model type
Protein coding
Short Description
trehalose phosphate synthase
Curator Summary
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
Computational Description
trehalose phosphate synthase (TPS10); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4634 Blast hits to 4564 proteins in 1018 species: Archae - 52; Bacteria - 2697; Metazoa - 162; Fungi - 655; Plants - 601; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink).
Link
InterPro Scan - TAIR