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54-4866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26395070 [Map]; Strand: w
      • AT5G65990.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4866-1 - 5-prime edge
    TTCGGGATCA TCCTCCCATT CGCTGCCGCC GACGGAAGAC ACTCCTCTTT 
    TGGGGCCTCG AACATTGTCG TCGCAGCCAA AAACCTTTGC AAATGTCTTC
    ATCGCCATCG TCGGCGCCGG CGTGCTCGGA CTTCCGTACA CCTTCAAGAA
    GACTGGATGG CTCTTGGGCC TCCTCACACT CCTCTTCGTA TCCTCCCTCA
    CCTTCTTCTG TATGATGCTC CTCGTCCACA CCCGCCGGAA ACTCGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26394954 [Map]; Strand: w
      • AT5G65990.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4866-1 - 3-prime edge
    ATCCCGAAGG CAGCGAATGG GAGGACGATC CCGCTTCCTG ATCGTACCTC 
    ATGCCGATCG AAATTGAGAG TGAAGAAGAG CCGAGAGTCA CAGTCTACGT
    TAATGGCGAT CGATCTCTGA TTGGGTGTGT TGTATATGTT TGTGTGGTCA
    AATGATATCT GTTTTATCTT TTTCCCTTTT TTAAGTCATT AAGAAAAAGA
    TACAAAACTT TCATTGGCTC TTGTTTGGGG TTTCTCAATT TAAGAAATAG
    TAGTATTTGC TTAAGCAATA AACAAAACTC TGACATTTGA CTCGTGTTAC
    TTATGTGCTT AACCAAACTA AATTTTCTAA TCAACTAATG AATGAGCTGT
    TGAATT

AT5G65990.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR