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Mutant Lines
54-4925-1

54-4925-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 61025 [Map]; Strand: w
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: -1739; Region: intergenic
  - AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: -2385; Region: intergenic
Flanking Genome Sequence: 54-4925-1 - 5-prime edge
```
AAGGCACCCT TCATCACAAG CAACACACCC AACCCCACTC AATCGGATAG 
TTCGTATGAT GAACAGAATC GTGCTTTGCC ATAATTAGAG GAAGAAACAA 
GTCAGCTAAA TATATTAATC TTGTCAAACA ATAATTTATA TTGAAGGATA 
ACGTGTTAGA GTTTGTATGC ATGTA
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 60909 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -1623; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -2501; Region: intergenic

GGTGCCTTGA GACGAGAGAA AAGAACATGT TTTCACCACG TAACTTACTT 
CACCCTCACG AAGTTAACAC ACACATATAT TATAGTATTC CAATATACCA 
AATATTATAT TAATATATCA TGAAACTTGA AAATGTGTTG GTGTATTATG 
TATGTCGNTA AGAAATAATA TTAATACAGT TTCGCGATCA TTTCAAGATT 
TATAATANTT TTGTATAAGA AAGAAAAGTG TGAGAAGTAG TNGNTAGCAN 
ATCACATGGG AACATATAAA CTAATTAAAT CTTAAAAATG AACATTNTAA 
CTTTTTGTTG TTATATAAAG TAAGTTAACT ATCAATANTC ATCANATATT 
TATGGCNCTT AACAAGTATT ATAATATGGG ACTAAGAATT ACTATACAAG 
AAACNGAACT CTGTGTTTTT TTGTGCGGCC ATAATTCNCA TATAAAAGAT 
AGANGCAGAA TCTGATATTG TNNATACAAA GNNAAANNGN NGGGTTTTGN 
NNAANCAAAN NAANNGGTGG GCCCCCANNN GGGGGGGGNN NNCNANNTCN 
NGNNCCCNNT GTTTTTGNNN CGGGGGNNNT TTTTTNNNNA ANNGGGGNNN 
NGAACCGGNG NNNTNNTNNN TTTTTTGNNN NNGGGGGGNA NNCNAAAANC 
NCCNNCCNGG NNNNGGGGNN TNNNAAANAA ANAANNNNGG NGGGGGGGGN 
AANNGGAAAN

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR