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54-4932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1582719 [Map]; Strand: w
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: -172; Region: promoter
    Flanking Genome Sequence: 54-4932-1 - 5-prime edge 
    CTGGTAAAAA CNAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CTCTACTGGT AATGGTAACA CCCTCTTTCT 
    CCATTAACTC TCCTAGCAGA ACAACAGAGC TAATTTTGCA ATTTATACAC 
    ACCATTTTAG GTAATTCATC TCTTAAATAA ATAAATTAAT GCGAATTTTT 
    CTTGAATAAA GGACCAAATG TTAATTTTAA AATCATTAAA TTTTTGCAGA 
    GCATTATGCG AATTTCTTGG AATTAANGGG GGGNAATATG AAGCTACCAG 
    NCCGGGCGNT GACCACCGGG CCCCTTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1582721 [Map]; Strand: w
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: -174; Region: promoter
    Flanking Genome Sequence: 54-4932-1 - 3-prime edge 
    TGAAAACGGN AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    GTACAACTAT AGTTGCAGAG TTCAGGGGTT CCTTGGAGTA GCATTAAAGT 
    CTCAAAGGAG AGAAAAATAA AAAAAAAATN CATTAAAGAC AAATTGAGTC 
    TTTTCTCATA AATGGTTTCT TTGTAGNGTT TATGATTTGT TTTTACAGAG 
    GAAAGATCTA AAAAGAGAAC AAAGATNTGG TTTATTTTTC GTCAANATTT 
    TTTCTCATGA ACATTGGAGT TTCAATACNC CTGCTGCNAA AGGTAAAATT 
    CTTTTGCATT TGNNGCTAAN GCTAAAAAAC CTTTGANNAC CGGGAAAGGG 
    GTTAACCGGG GGAAAACCGG GGAAAAAANA CCCAANCCCC TGTNNGGGAA 
    TTTACCCCCC NGGAAAAAAA GGGNGGGNGN AAAAAAANAA AACTTCACAA 
    CCCGGGGCCN TTTNNCNCCC GNNTCCCCNT TNNAAAANAC NNTNCCCANA 
    ATTTTNGGGN CCCCCCNNNN AANNNNNCAN NNCCCGGGGG CGGNNNAANC 
    NNCNNGNCCC CTNTTTNNAN NGNNGNANAN NANNNNTAAT NNNNGNANNN 
    NNACNNNNCA GNAANNNNNN NNNAANTNNN NNANNCNGGN CNNAANNNAN 
    NNNNCNNGNN CNNNNNNCAN NNACNCTANN NANNCCNANG NCTNNANNNC 
    ANCAANNTNA NANGACGNTA AANNNANNNN NAANNANNNN CANNTNCNAA 
    NAAANTTNTN NNAAAAAAGN ANNAANAANN NAAANAAGAN NNANTGTG

AT3G05470.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).
Link
InterPro Scan - TAIR