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Mutant Lines
54-5048-1

54-5048-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 124934 [Map]; Strand: c
- AT4G00290.1 - [+] show detail - Mechanosensitive ion channel protein
  Distance: 0; Region: exon2 (CDS)

ATGGGAATGG GAATGGGAAT GATTGGGTTG AGAAAGCTAA AGATGTGTTG 
CAGACTAGTG TCGATGCTGT TACTGAGACT GCAAAGAAGA CTAAAGATGT 
CTCTGATGAG ATGATCCCTC ATGTTCAGCA GTTCCTTGAC TCTAACCCTT 
ATCTTAAAGA TGTTATAGTT CCTGTTAGTC TCACTATGAC TGGTACTTTA 
TTTGCTTGGG TTGTGATGCC TAGGATTCTT AGAAGGTTTC ACACTTATGC 
TATGCAAAGT TCCGCTAAAC TGCTTCCCGT TGGCTTCTCT AACGAAGATG 
TTCCTTATGA GAAAAGCT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 125050 [Map]; Strand: c
  - AT4G00290.1 - [+] show detail - Mechanosensitive ion channel protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 54-5048-1 - 3-prime edge
```
ATTCCCATCA CCAGAGCCAG TAACACCAGA GGCTACAATA CTTCCGAAAT 
CATCAGATTT GGAGCTGAAA GCTCGTGCGT ACGAAGAATG GCCTAAGTAA 
TTGAAAGGCT TAGCATCATT ATGCAGGCGT ATATTCGATG AAAAGGAGAT 
CATCGAAGGA GAAGCT
```

AT4G00290.1

Model type: Protein coding
Short Description: Mechanosensitive ion channel protein
Computational Description: Mechanosensitive ion channel protein; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS, transmembrane-2 (InterPro:IPR011014), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00234.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR